RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 LDB1Q86U70 411 aaPredicted RBP12.12□□□□□ -0.47
SCARB1-204ENST00000535005 HEATR4Q86WZ0 1026 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 TMEFF1Q8IYR6 380 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 BANPQ8N9N5 519 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 RAB3IL1Q8TBN0 382 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 LPGAT1Q92604 370 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 FUBP1Q96AE4 644 aaKnown RBP12.12□□□□□ -0.47
SCARB1-204ENST00000535005 SERAC1Q96JX3 654 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 HSPA12BQ96MM6 686 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 APOOQ9BUR5 198 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 TRIM39Q9HCM9 518 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 PHPT1Q9NRX4 125 aaPredicted RBP12.12□□□□□ -0.47
SCARB1-204ENST00000535005 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 SLC17A6Q9P2U8 582 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
SCARB1-204ENST00000535005 SMIM31A0A1B0GVY4 71 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MEI4A8MW99 385 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 INPP4BO15327 924 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ZNF7P17097 686 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RPS3P23396 243 aaKnown RBP eCLIP12.11□□□□□ -0.474e-7■■■■□ 20.6
SCARB1-204ENST00000535005 GSTT1P30711 240 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PGM1P36871 562 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 NSG1P42857 185 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 CD151P48509 253 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 CLDN2P57739 230 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SESN3P58005 492 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 KIAA1024LP59773 190 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MPP1Q00013 466 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SRSF5Q13243 272 aaKnown RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PLK5Q496M5 336 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 FOXB2Q5VYV0 432 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ABCA7Q8IZY2 2146 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 DEFB119Q8N690 84 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PNPLA1Q8N8W4 532 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PAFAH2Q99487 392 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SIKE1Q9BRV8 207 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 P2RY12Q9H244 342 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 C1orf21Q9H246 121 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RHOJQ9H4E5 214 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 GPR27Q9NS67 375 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 NDE1Q9NXR1 346 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 TXNDC16Q9P2K2 825 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ATXN10Q9UBB4 475 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 EIF2B4Q9UI10 523 aaKnown RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PRMT5O14744 637 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 VEGFDO43915 354 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 INHBAP08476 426 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RALBP11234 206 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SPRP35270 261 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RABIFP47224 123 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SERPINB4P48594 390 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SERPINB9P50453 376 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RACK1P63244 317 aaKnown RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 IRX4P78413 519 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 OVGP1Q12889 678 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ZNF789Q5FWF6 425 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 CNSTQ6PJW8 725 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 LCA5Q86VQ0 697 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 IQCHQ86VS3 1027 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ZC3HC1Q86WB0 502 aaKnown RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MFSD2AQ8NA29 543 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MZB1Q8WU39 189 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 SNX19Q92543 992 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 APOPT1Q96IL0 206 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 RBBP8Q99708 897 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 MYOCQ99972 504 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 LRFN3Q9BTN0 628 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 LGR4Q9BXB1 951 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 TMEM120AQ9BXJ8 343 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 ZCCHC2Q9C0B9 1178 aaKnown RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 CIDEBQ9UHD4 219 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 OR1A2Q9Y585 309 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PCDHB1Q9Y5F3 818 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 COMMD10Q9Y6G5 202 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
SCARB1-204ENST00000535005 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
SCARB1-204ENST00000535005 PLXNB3Q9ULL4 1909 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 IQANK1A0A1B0GTG1 560 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 A0A1W2PR77 199 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 GPR89AB7ZAQ6 455 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 CACNB4O00305 520 aaPredicted RBP12.1□□□□□ -0.47
SCARB1-204ENST00000535005 OR1I1O60431 355 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 AP2A2O94973 939 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 ESR1P03372 595 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
SCARB1-204ENST00000535005 GPR89BP0CG08 455 aa12.1□□□□□ -0.47
SCARB1-204ENST00000535005 MSH3P20585 1137 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms