RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 MIER2Q8N344 545 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 MINDY1Q8N5J2 469 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 PCDH20Q8N6Y1 951 aaKnown RBP9.53□□□□□ -0.88
CHKA-207ENST00000533728 PDPRQ8NCN5 879 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 ADCY4Q8NFM4 1077 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 OR2AP1Q8NGE2 309 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 HMGCLL1Q8TB92 370 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 SH3RF2Q8TEC5 729 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 DDI1Q8WTU0 396 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 UBTD2Q8WUN7 234 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 ULK4Q96C45 1275 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 ECHDC3Q96DC8 303 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 OTUB2Q96DC9 234 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 ZNF641Q96N77 438 aaPredicted RBP9.53□□□□□ -0.88
CHKA-207ENST00000533728 CDCA3Q99618 268 aaPredicted RBP9.53□□□□□ -0.88
CHKA-207ENST00000533728 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 SHCBP1LQ9BZQ2 653 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 KLHL4Q9C0H6 718 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 CLPBQ9H078 707 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 AKTIPQ9H8T0 292 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 RDH14Q9HBH5 336 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 TNFRSF12AQ9NP84 129 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 SEMA4GQ9NTN9 838 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 RIC8BQ9NVN3 520 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 CFAP97Q9P2B7 532 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 LIMD1Q9UGP4 676 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 CROTQ9UKG9 612 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 PCTPQ9UKL6 214 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 CNOT11Q9UKZ1 510 aaKnown RBP9.53□□□□□ -0.88
CHKA-207ENST00000533728 WASF3Q9UPY6 502 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 PCDHGA7Q9Y5G6 932 aa9.53□□□□□ -0.88
CHKA-207ENST00000533728 KIF26AQ9ULI4 1882 aaPredicted RBP9.53□□□□□ -0.88
CHKA-207ENST00000533728 SETD2Q9BYW2 2564 aaPredicted RBP9.53□□□□□ -0.88
CHKA-207ENST00000533728 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 PRSS51A0A1B0GVH4 220 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 A6NHS1 94 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 WASH3PC4AMC7 463 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 LEFTY2O00292 366 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 CDC7O00311 574 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 IFRD1O00458 451 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 BTN3A1O00481 513 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 GAPDHSO14556 408 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 ACOT8O14734 319 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 MRASO14807 208 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 TM4SF5O14894 197 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 GIPC1O14908 333 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 RAD51BO15315 384 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 NIPSNAP2O75323 286 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 SMNDC1O75940 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHKA-207ENST00000533728 WDR47O94967 919 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 BAG2O95816 211 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 S100BP04271 92 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 C8AP07357 584 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 C8BP07358 591 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ENO3P13929 434 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 MSH3P20585 1137 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 DGKAP23743 735 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 LAMA1P25391 3075 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 NFKBIAP25963 317 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ACRV1P26436 265 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 SPAM1P38567 509 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ZXDBP98169 803 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 NFATC2Q13469 925 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 CEACAM7Q14002 265 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 PDCD4Q53EL6 469 aaKnown RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 GK5Q6ZS86 529 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 TPRG1Q6ZUI0 275 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 TAS2R42Q7RTR8 314 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 SERPINA9Q86WD7 417 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 RAVER1Q8IY67 606 aaKnown RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 APCDD1Q8J025 514 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 RYBPQ8N488 228 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 MRPL43Q8N983 215 aaKnown RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 PYDC1Q8WXC3 89 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ZUFSPQ96AP4 578 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 LINGO1Q96FE5 620 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 PPP1R36Q96LQ0 422 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 PLEKHG4BQ96PX9 1271 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 MCCC1Q96RQ3 725 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 GPATCH1Q9BRR8 931 aaKnown RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 SLC2A11Q9BYW1 496 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 BRINP2Q9C0B6 783 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 SPAG4Q9NPE6 437 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ACSS2Q9NR19 701 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ASAH2Q9NR71 780 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 RAD18Q9NS91 495 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 GID8Q9NWU2 228 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ZIM2Q9NZV7 527 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 TMEM181Q9P2C4 612 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 TBC1D14Q9P2M4 693 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 NFKBIL1Q9UBC1 381 aaPredicted RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 ABCD2Q9UBJ2 740 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 CD300AQ9UGN4 299 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 ST14Q9Y5Y6 855 aa9.52□□□□□ -0.89
CHKA-207ENST00000533728 ZFC3H1O60293 1989 aaKnown RBP9.52□□□□□ -0.89
CHKA-207ENST00000533728 GLYATL1P3A0A0U1RQE8 302 aa9.51□□□□□ -0.89
CHKA-207ENST00000533728 NPEPPSL1A6NEC2 478 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms