RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 INSM2Q96T92 566 aaPredicted RBP17.11■□□□□ 0.33
NXF1-217ENST00000533671 CMKLR1Q99788 373 aa17.11■□□□□ 0.33
NXF1-217ENST00000533671 MARCH4Q9P2E8 410 aaPredicted RBP17.11■□□□□ 0.33
NXF1-217ENST00000533671 ZMIZ1Q9ULJ6 1067 aa17.11■□□□□ 0.33
NXF1-217ENST00000533671 COLEC10Q9Y6Z7 277 aa17.11■□□□□ 0.33
NXF1-217ENST00000533671 ACACBO00763 2458 aa17.11■□□□□ 0.33
NXF1-217ENST00000533671 BPTFQ12830 3046 aa17.11■□□□□ 0.33
NXF1-217ENST00000533671 CHD8Q9HCK8 2581 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 AKAP13Q12802 2813 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 PRAMEF33A0A0G2JMD5 474 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 SMAPO00193 183 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 PRMT5O14744 637 aaPredicted RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 NDC80O14777 642 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 LIN7AO14910 233 aaPredicted RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 PLD2O14939 933 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 UBXN7O94888 489 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 HOXB3P14651 431 aaPredicted RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 ITGB6P18564 788 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 LIMK2P53671 638 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 CKAP4Q07065 602 aaKnown RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 ZFP36L1Q07352 338 aaKnown RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 C2orf54Q08AI8 447 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 RPA4Q13156 261 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 SQSTM1Q13501 440 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 BOP1Q14137 746 aaKnown RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 MORF4L2Q15014 288 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 TMPRSS9Q7Z410 1059 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 PLXDC1Q8IUK5 500 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 SLITRK4Q8IW52 837 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
NXF1-217ENST00000533671 TMEM159Q96B96 161 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 SNF8Q96H20 258 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 CCDC74BQ96LY2 380 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 FERD3LQ96RJ6 166 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 DKK4Q9UBT3 224 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 KLHL3Q9UH77 587 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 GNPTGQ9UJJ9 305 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 LOXL2Q9Y4K0 774 aa17.1■□□□□ 0.33
NXF1-217ENST00000533671 IGHV5-10-1A0A0J9YXX1 117 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 A8MU76 341 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 USP1O94782 785 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 TNFSF15O95150 251 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 NDUFS1P28331 727 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 CSF2RBP32927 897 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 CSTF2P33240 577 aaKnown RBP eCLIP17.09■□□□□ 0.33
NXF1-217ENST00000533671 PREPP48147 710 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 ITGA8P53708 1063 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 PLOD1Q02809 727 aaPredicted RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 DHX9Q08211 1270 aaKnown RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 TRA2AQ13595 282 aaKnown RBP eCLIP17.09■□□□□ 0.336e-8■■■■□ 25.7
NXF1-217ENST00000533671 BBS9Q3SYG4 887 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 NEPROQ6NW34 567 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 KLHL35Q6PF15 583 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 WDR74Q6RFH5 385 aaPredicted RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 ZNF574Q6ZN55 896 aaPredicted RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 LRRC6Q86X45 466 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 PROSER1Q86XN7 944 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 RCBTB1Q8NDN9 531 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 GPR150Q8NGU9 434 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 PANX3Q96QZ0 392 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
NXF1-217ENST00000533671 THSD1Q9NS62 852 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 TMEM9Q9P0T7 183 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 PISDQ9UG56 409 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 PCDHGA8Q9Y5G5 932 aa17.09■□□□□ 0.33
NXF1-217ENST00000533671 FAM187AA6NFU0 413 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 HGSO14964 777 aaPredicted RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 HGFP14210 728 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 IVDP26440 423 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 ARNTP27540 789 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 MAGEA3P43357 314 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 MAPK10P53779 464 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 CSE1LP55060 971 aaKnown RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 EIF3BP55884 814 aaKnown RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 CFHR1Q03591 330 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 TMED2Q15363 201 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 LONRF1Q17RB8 773 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 CAPRIN2Q6IMN6 1127 aaKnown RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 BBOF1Q8ND07 529 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 GSDMBQ8TAX9 411 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 CALML6Q8TD86 181 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 JPH3Q8WXH2 748 aaPredicted RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 SIGLEC10Q96LC7 697 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 ZNF578Q96N58 590 aaPredicted RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 FCRL3Q96P31 734 aaPredicted RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 TCF12Q99081 682 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 CARD6Q9BX69 1037 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 C20orf96Q9NUD7 363 aaPredicted RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 IL1RAPL1Q9NZN1 696 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.32
NXF1-217ENST00000533671 MAP1BP46821 2468 aaKnown RBP17.08■□□□□ 0.32
NXF1-217ENST00000533671 APOA4P06727 396 aa17.07■□□□□ 0.32
NXF1-217ENST00000533671 THRAP10827 490 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms