RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PPIGQ13427 754 aaKnown RBP eCLIP17.32■□□□□ 0.365e-8■■■□□ 18.2
PHRF1-205ENST00000533464 LIN52Q52LA3 116 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 PIM3Q86V86 326 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 CAND1Q86VP6 1230 aaKnown RBP17.32■□□□□ 0.36
PHRF1-205ENST00000533464 TEX47Q8TBZ9 253 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 SLITRK2Q9H156 845 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 CNTN5O94779 1100 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 NR1D2Q14995 579 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 RFTN2Q52LD8 501 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-205ENST00000533464 ATAT1Q5SQI0 421 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 LYSMD3Q7Z3D4 306 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 RELL1Q8IUW5 271 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 SUV39H2Q9H5I1 410 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 BTBD3Q9Y2F9 522 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 KCTD3Q9Y597 815 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 DPPA5A6NC42 116 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 GJA1P17302 382 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 PITX1P78337 314 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-205ENST00000533464 GPR17Q13304 367 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 GPR33Q49SQ1 333 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 MS4A13Q5J8X5 152 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 KLHL23Q8NBE8 558 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 ADAMTS15Q8TE58 950 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 UBASH3BQ8TF42 649 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 ABCB10Q9NRK6 738 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 ZDHHC2Q9UIJ5 367 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 PCDHGA11Q9Y5H2 935 aa17.32■□□□□ 0.36
PHRF1-205ENST00000533464 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 TSC22D2O75157 780 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 UGT2B11O75310 529 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 TBX10O75333 385 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 ECI2O75521 394 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 HLA-DQA2P01906 255 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 HIST1H2ABP04908 130 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 GNAZP19086 355 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 MAPK12P53778 367 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 TAS2R41P59536 307 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 BLMHQ13867 455 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 HIST3H2AQ7L7L0 130 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 HIST1H2ACQ93077 130 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 MTERF1Q99551 399 aaKnown RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 PLGRKTQ9HBL7 147 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 EXD2Q9NVH0 621 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 CYTH4Q9UIA0 394 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 PRG2P13727 222 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 SLC11A1P49279 550 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 GCNT6Q5T4J0 391 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 COMMD2Q86X83 199 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 PYCR2Q96C36 320 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 PTGFRNQ9P2B2 879 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 MFN2O95140 757 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 FABP3P05413 133 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 ERVK-8P63133 956 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 CARD16Q5EG05 197 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 TMEM214Q6NUQ4 689 aaKnown RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 GALNT18Q6P9A2 607 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 OR52J3Q8NH60 311 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 CRNNQ9UBG3 495 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 BCKDKO14874 412 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 UGT2B17O75795 530 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 SOX4Q06945 474 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 GLB1L3Q8NCI6 653 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 ADI1Q9BV57 179 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 EBF3Q9H4W6 596 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 AKTIPQ9H8T0 292 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 MAT2BQ9NZL9 334 aa17.31■□□□□ 0.36
PHRF1-205ENST00000533464 ZNF624Q9P2J8 865 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 SUCOQ9UBS9 1254 aaKnown RBP17.31■□□□□ 0.36
PHRF1-205ENST00000533464 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 TULP3O75386 442 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 GALNT13Q8IUC8 556 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 SLC43A3Q8NBI5 491 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 PIH1D2Q8WWB5 315 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 TTLL2Q9BWV7 592 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 USP29Q9HBJ7 922 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 GALPQ9UBC7 116 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 ERVW-1Q9UQF0 538 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 NR2F6P10588 404 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 PSMA8Q8TAA3 256 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 SEC14L1Q92503 715 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 RAD51AP1Q96B01 352 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 CHID1Q9BWS9 393 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 ANKRD66B4E2M5 251 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 CCNDBP1O95273 360 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 HMGCS1Q01581 520 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 ZNF33AQ06730 810 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 COQ10BQ9H8M1 238 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 MAGEB17A8MXT2 336 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 KERAO60938 352 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 CAPN15O75808 1086 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 LPIN1Q14693 890 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 TIFABQ6ZNK6 161 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 SMYD1Q8NB12 490 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 UXS1Q8NBZ7 420 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 LMAN2LQ9H0V9 348 aa17.3■□□□□ 0.36
PHRF1-205ENST00000533464 IFT80Q9P2H3 777 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-205ENST00000533464 FAM234BA2RU67 622 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms