RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	SLC35G4	P0C7Q5	338 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	MTHFD1	P11586	935 aa	Known RBP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ITGB6	P18564	788 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TPSB2	P20231	275 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	NSG1	P42857	185 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ARCN1	P48444	511 aa	Known RBP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	SEPHS1	P49903	392 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PRAME	P78395	509 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ACVR1	Q04771	509 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PLCL1	Q15111	1095 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TPSAB1	Q15661	275 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CYP1B1	Q16678	543 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ZNF658B	Q4V348	819 aa	Predicted RBP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	FASTKD1	Q53R41	847 aa	Known RBP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	IRGC	Q6NXR0	463 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	LRRC8B	Q6P9F7	803 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	AFTPH	Q6ULP2	937 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	FAM92B	Q6ZTR7	304 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ARHGAP22	Q7Z5H3	698 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ZFAND4	Q86XD8	727 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	HM13	Q8TCT9	377 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CPT1B	Q92523	772 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ART4	Q93070	314 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CTRC	Q99895	268 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	DPYSL5	Q9BPU6	564 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TRIM56	Q9BRZ2	755 aa	Known RBP	11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CCM2	Q9BSQ5	444 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	IL22	Q9GZX6	179 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	COG4	Q9H9E3	785 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	UCK1	Q9HA47	277 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	BFAR	Q9NZS9	450 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PDP2	Q9P2J9	529 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	NEU2	Q9Y3R4	380 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	MGA	Q8IWI9	3026 aa		11.22	□□□□□ -0.61
CHORDC1-208	ENST00000533062	FANCG	O15287	622 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	NVL	O15381	856 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	RASSF9	O75901	435 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	AP2A2	O94973	939 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CAPZB	P47756	277 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	NPY2R	P49146	381 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CSE1L	P55060	971 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	SRSF6	Q13247	344 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CLN3	Q13286	438 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	LAMB3	Q13751	1172 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	KRT33B	Q14525	404 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ITIH4	Q14624	930 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	NLRP9	Q7RTR0	991 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PDZD3	Q86UT5	571 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CAND1	Q86VP6	1230 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PLXDC1	Q8IUK5	500 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	RBM12B	Q8IXT5	1001 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PHC3	Q8NDX5	983 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ELMO1	Q92556	727 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TMEM159	Q96B96	161 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	MFSD3	Q96ES6	412 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	C9orf72	Q96LT7	481 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	DDX47	Q9H0S4	455 aa	Known RBP	11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	OR52A5	Q9H2C5	316 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CPNE5	Q9HCH3	593 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	APMAP	Q9HDC9	416 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	TREX1	Q9NSU2	369 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	CATSPERZ	Q9NTU4	200 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	SLC39A1	Q9NY26	324 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	RIMKLB	Q9ULI2	386 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	PCDHGA7	Q9Y5G6	932 aa		11.21	□□□□□ -0.61
CHORDC1-208	ENST00000533062	ADAMTS20	P59510	1910 aa		11.21	□□□□□ -0.62
CHORDC1-208	ENST00000533062	MN1	Q10571	1320 aa	Predicted RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	GOLGA6L10	A0A0M3HER8	536 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	C17orf113	A0A1B0GUU1	675 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	IQCF5	A8MTL0	148 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	CES2	O00748	559 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	CD3EAP	O15446	510 aa	Known RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	VAPB	O95292	243 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	C9	P02748	559 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	F7	P08709	466 aa	Predicted RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	ARNT	P27540	789 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	MLLT3	P42568	568 aa	Predicted RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	MAGEA6	P43360	314 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	CXADR	P78310	365 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	CDK16	Q00536	496 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	PRKG2	Q13237	762 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	BOP1	Q14137	746 aa	Known RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	ANKS6	Q68DC2	871 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	CASC4	Q6P4E1	433 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	PACS1	Q6VY07	963 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	BMPER	Q8N8U9	685 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	OR4E2	Q8NGC2	313 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	LKAAEAR1	Q8TD35	194 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	TAAR9	Q96RI9	348 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	FERD3L	Q96RJ6	166 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	NAPG	Q99747	312 aa	Predicted RBP	11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	KIFC1	Q9BW19	673 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	DPH1	Q9BZG8	443 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	EPB41L1	Q9H4G0	881 aa		11.2	□□□□□ -0.62
CHORDC1-208	ENST00000533062	VPS37B	Q9H9H4	285 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms