RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 CPLX4Q7Z7G2 160 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 ZBTB44Q8NCP5 570 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 EXT2Q93063 718 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 PHF21BQ96EK2 531 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 PITPNM3Q9BZ71 974 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 FAM8A1Q9UBU6 413 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 MAP3K13O43283 966 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 VEGFDO43915 354 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 KERAO60938 352 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 FTH1P02794 183 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 SERPINE1P05121 402 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 IGHV4-34P06331 123 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 NAGLUP54802 743 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 OCRLQ01968 901 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 BOP1Q14137 746 aaKnown RBP21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 LIPMQ5VYY2 423 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 ZC3H14Q6PJT7 736 aaKnown RBP21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 SBSNQ6UWP8 590 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 C11orf96Q7Z7L8 435 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 TRIM42Q8IWZ5 723 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 ZNF473Q8WTR7 871 aaKnown RBP21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 GAB3Q8WWW8 586 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 IRF2BPLQ9H1B7 796 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 KCNH6Q9H252 994 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 WDR26Q9H7D7 661 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 ANKRD12Q6UB98 2062 aa21.55■■□□□ 1.04
PACSIN3-209ENST00000532457 H0Y8X5 98 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 CHUKO15111 745 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 LATO43561 262 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 PBLDP30039 288 aaPredicted RBP21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 PRKAA2P54646 552 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 OVGP1Q12889 678 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 PLEKHS1Q5SXH7 462 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 CRTC3Q6UUV7 619 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 RPS27LQ71UM5 84 aaKnown RBP21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 RAB3IL1Q8TBN0 382 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 FOXJ1Q92949 421 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 THOC1Q96FV9 657 aaKnown RBP21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 BMFQ96LC9 184 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 ELAC2Q9BQ52 826 aaKnown RBP21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 APOOQ9BUR5 198 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 TSSK1BQ9BXA7 367 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 SLC23A2Q9UGH3 650 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 MID2Q9UJV3 735 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 RNF112Q9ULX5 631 aa21.54■■□□□ 1.04
PACSIN3-209ENST00000532457 VPS13AQ96RL7 3174 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 SLC5A10A0PJK1 596 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 LRRC14BA6NHZ5 514 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 IPO13O94829 963 aaKnown RBP21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 SLCO2B1O94956 709 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 PREPP48147 710 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 SLC1A6P48664 564 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 RGS4P49798 205 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 ATG16L1Q676U5 607 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 PIGWQ7Z7B1 504 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 TRAPPC5Q8IUR0 188 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 PPP1R14CQ8TAE6 165 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 TMEM237Q96Q45 408 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 SORT1Q99523 831 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 TM7SF3Q9NS93 570 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 INVSQ9Y283 1065 aa21.53■■□□□ 1.04
PACSIN3-209ENST00000532457 NUAK1O60285 661 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 POP7O75817 140 aaKnown RBP21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 CBSLP0DN79 551 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 PDHA2P29803 388 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 CBSP35520 551 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 DNAJB13P59910 316 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 PPP1R3AQ16821 1122 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 TTLL9Q3SXZ7 439 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 FBXO48Q5FWF7 155 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 MYO1HQ8N1T3 1032 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 GPR174Q9BXC1 333 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 C1QTNF7Q9BXJ2 289 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 ZCCHC2Q9C0B9 1178 aaKnown RBP21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 PCED1AQ9H1Q7 454 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 UTP6Q9NYH9 597 aaKnown RBP21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 NCKIPSDQ9NZQ3 722 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 GPR34Q9UPC5 381 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 QSOX1O00391 747 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 TPBGLP0DKB5 382 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 RPL6Q02878 288 aaKnown RBP21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 PHKG1Q16816 387 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 PFKFB4Q16877 469 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 TPRG1LQ5T0D9 272 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 GPSM1Q86YR5 675 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 LSMEM2Q8N112 164 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 ASZ1Q8WWH4 475 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 LINC00615Q96LM1 132 aaPredicted RBP21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 THAP1Q9NVV9 213 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 PLXND1Q9Y4D7 1925 aa21.52■■□□□ 1.04
PACSIN3-209ENST00000532457 NCF1BA6NI72 391 aaPredicted RBP21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 NCF1CA8MVU1 366 aaPredicted RBP21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 F8W8V4 182 aa21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 NDUFAB1O14561 156 aa21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 KPNA5O15131 536 aa21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 CEACAM5P06731 702 aa21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 MYCLP1P12525 358 aaPredicted RBP21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 NCF1P14598 390 aaPredicted RBP21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 GRK2P25098 689 aa21.51■■□□□ 1.03
PACSIN3-209ENST00000532457 ABCE1P61221 599 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms