RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 ENPP3O14638 875 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 IQCF3P0C7M6 154 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 FSHRP23945 695 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 CCKBRP32239 447 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 CRELD2Q6UXH1 353 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 OTOP3Q7RTS5 596 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 TRABD2AQ86V40 505 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 LRRC17Q8N6Y2 441 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 C11orf65Q8NCR3 313 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ART5Q96L15 291 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SAMD11Q96NU1 681 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 PSKH2Q96QS6 385 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 PLLPQ9Y342 182 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 PPEF2O14830 753 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SLC7A4O43246 635 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 TULP3O75386 442 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ANPEPP15144 967 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 FGFR3P22607 806 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 RGS8P57771 180 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 DGCR6Q14129 220 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 PDGFRLQ15198 375 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 NRF1Q16656 503 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SERINC5Q86VE9 423 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SERPINA9Q86WD7 417 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 RASGEF1AQ8N9B8 481 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 HM13Q8TCT9 377 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 TWIST2Q8WVJ9 160 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 NUS1Q96E22 293 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 APOLD1Q96LR9 279 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 HIST1H2AAQ96QV6 131 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 GPER1Q99527 375 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 RAD9AQ99638 391 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 GPR21Q99679 349 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 MIPEPQ99797 713 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 COQ7Q99807 217 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ACAT2Q9BWD1 397 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 IPPKQ9H8X2 491 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 CLK4Q9HAZ1 481 aaKnown RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 APOBEC3GQ9HC16 384 aaKnown RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 IL23AQ9NPF7 189 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 IL36AQ9UHA7 158 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 MAN2B2Q9Y2E5 1009 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 PCDHGB5Q9Y5G0 923 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ADAMDEC1O15204 470 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 OR1F1O43749 312 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SAGP10523 405 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 DNASE1L1P49184 302 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 DAOAP59103 153 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 DLG1Q12959 904 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 RIPK1Q13546 671 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ZNF311Q5JNZ3 666 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 ADGRG6Q86SQ4 1221 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 PLD5Q8N7P1 536 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 CNTD1Q8N815 330 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SCAMP5Q8TAC9 235 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 RNF31Q96EP0 1072 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 HMCESQ96FZ2 354 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 NSMCE3Q96MG7 304 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 SDCBP2Q9H190 292 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 YIPF1Q9Y548 306 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 GPC6Q9Y625 555 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-225ENST00000530094 CCDC88AQ3V6T2 1871 aa8.35□□□□□ -1.07
CTNND1-225ENST00000530094 NPHS1O60500 1241 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 TNFP01375 233 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SHBGP04278 402 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 IFNA6P05013 189 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 NR2C1P13056 603 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 LIMK2P53671 638 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SRP54P61011 504 aaKnown RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 CYP4F2P78329 520 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 PDK3Q15120 406 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 TTMPQ5BVD1 217 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 DCST1Q5T197 706 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 TAC4Q86UU9 113 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SIX5Q8N196 739 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SVOPLQ8N434 492 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 TSEN2Q8NCE0 465 aaKnown RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 ROPN1LQ96C74 230 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 C7orf26Q96N11 449 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 PCDHB18PQ96TA0 734 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 DCUN1D5Q9BTE7 237 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 TRIM2Q9C040 744 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 DPEP2Q9H4A9 486 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 MRPS30Q9NP92 439 aaKnown RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 RUVBL1Q9Y265 456 aaKnown RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 CFL2Q9Y281 166 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 COL2A1P02458 1487 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SLC22A2O15244 555 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 AKAP8O43823 692 aaKnown RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 GMFBP60983 142 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 DENND5AQ6IQ26 1287 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 SCIMPQ6UWF3 145 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 C7orf57Q8NEG2 295 aa8.34□□□□□ -1.07
CTNND1-225ENST00000530094 EFHD2Q96C19 240 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-225ENST00000530094 ZNF282Q9UDV7 671 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms