RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MCUQ8NE86 351 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 COG4Q9H9E3 785 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 KCND1Q9NSA2 647 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 PCYOX1Q9UHG3 505 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 SOX13Q9UN79 622 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 CFAP20Q9Y6A4 193 aaKnown RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MAD1L1Q9Y6D9 718 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 URB1O60287 2271 aaKnown RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 BPTFQ12830 3046 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 DSPP15924 2871 aaKnown RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 A8MU76 341 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 HGSO14964 777 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 SGTAO43765 313 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 DXOO77932 396 aaKnown RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 TMEM63AO94886 807 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 ITGA2BP08514 1039 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 HGFP14210 728 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 NDUFS1P28331 727 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 CSF2RBP32927 897 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 RPA4Q13156 261 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 THOC5Q13769 683 aaKnown RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 TMEM164Q5U3C3 297 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 PTRHD1Q6GMV3 140 aaKnown RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 ARMC6Q6NXE6 501 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 ZNF534Q76KX8 674 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 TMPRSS9Q7Z410 1059 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 CAND1Q86VP6 1230 aaKnown RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 FAM129CQ86XR2 697 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 GSDMBQ8TAX9 411 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 SLCO2A1Q92959 643 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 MFSD3Q96ES6 412 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 SGSM3Q96HU1 749 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 SLC46A1Q96NT5 459 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 SERPINB12Q96P63 405 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-215ENST00000528396 TREX1Q9NSU2 369 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 FREM2Q5SZK8 3169 aa13.09□□□□□ -0.31
CAPN1-215ENST00000528396 UBA6A0AVT1 1052 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 TAF4O00268 1085 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 PRMT5O14744 637 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 LIN7AO14910 233 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 OR1I1O60431 355 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 RASSF9O75901 435 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 CAPNS1P04632 268 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 THRAP10827 490 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ITGB6P18564 788 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 CAPZBP47756 277 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 PREPP48147 710 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ETF1P62495 437 aaKnown RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 PLOD1Q02809 727 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 C16orf72Q14CZ0 275 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 BRD3Q15059 726 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 TMED2Q15363 201 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 RNF187Q5TA31 235 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 IRGCQ6NXR0 463 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 IGF2-ASQ6U949 168 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 SYT10Q6XYQ8 523 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ZNF574Q6ZN55 896 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 LDB1Q86U70 411 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 LILRA3Q8N6C8 439 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 GPR150Q8NGU9 434 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ZFPM2Q8WW38 1151 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ZNF669Q96BR6 464 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 ZDHHC12Q96GR4 267 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 TGM7Q96PF1 710 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 FERD3LQ96RJ6 166 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
CAPN1-215ENST00000528396 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 GNPTGQ9UJJ9 305 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 VPS9D1Q9Y2B5 631 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 PRSS21Q9Y6M0 314 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 RPS6KL1Q9Y6S9 549 aa13.08□□□□□ -0.32
CAPN1-215ENST00000528396 KIF26BQ2KJY2 2108 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 PRAMEF33A0A0G2JMD5 474 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 FAM237BA0A1B0GVD1 139 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 A0A1W2PNU3 283 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 PMS2P1A4D2B8 440 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 GOLGA8KD6RF30 607 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 GOLGA8TH3BQL2 631 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 CAPN5O15484 640 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 APOA4P06727 396 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 CD151P48509 253 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 CSE1LP55060 971 aaKnown RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 EIF3BP55884 814 aaKnown RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 SEMA3AQ14563 771 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms