RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 FAM8A1Q9UBU6 413 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 MTRF1LQ9UGC7 380 aaKnown RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PCDHB1Q9Y5F3 818 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 RNF215Q9Y6U7 377 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 IQCF5A8MTL0 148 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 H3BMM5 538 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 PPM1DO15297 605 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 HAUS5O94927 633 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 TRIM16O95361 564 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 F7P08709 466 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 GSTA2P09210 222 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CDK4P11802 303 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 XRCC1P18887 633 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 SSTR1P30872 391 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CCR7P32248 378 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 HALP42357 657 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 LEPRP48357 1165 aaKnown RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 UBE2IP63279 158 aaKnown RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 MPP1Q00013 466 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 E2F1Q01094 437 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 MGAT5Q09328 741 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 RPA4Q13156 261 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CCDC157Q569K6 752 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CTSL3PQ5NE16 218 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 N4BP2L1Q5TBK1 243 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 KIAA0408Q6ZU52 694 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CEP128Q6ZU80 1094 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CYS1Q717R9 158 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF438Q7Z4V0 828 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 GALNT7Q86SF2 657 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 SLC9B2Q86UD5 537 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 AVL9Q8NBF6 648 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 LKAAEAR1Q8TD35 194 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 ELMO1Q92556 727 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CCDC74AQ96AQ1 378 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 C9orf72Q96LT7 481 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 PANX3Q96QZ0 392 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 FMO2Q99518 471 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 WWP1Q9H0M0 922 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 LRRC4CQ9HCJ2 640 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 SARS2Q9NP81 518 aaKnown RBP12.66□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 CPNE7Q9UBL6 633 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 PSMD13Q9UNM6 376 aa12.66□□□□□ -0.38
SMPD1-202ENST00000526280 SLC5A10A0PJK1 596 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 OR52A4PA6NMU1 304 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 RHPN2P1A8MT19 583 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 AHSGP02765 367 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 PKMP14618 531 aaKnown RBP12.65□□□□□ -0.38
SMPD1-202ENST00000526280 ITGB6P18564 788 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 AOAHP28039 575 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 GABRB3P28472 473 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 PDHA2P29803 388 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 SLC19A1P41440 591 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 GPR3P46089 330 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 GPX6P59796 221 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 PLOD1Q02809 727 aaPredicted RBP12.65□□□□□ -0.38
SMPD1-202ENST00000526280 HHEXQ03014 270 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 NR1D2Q14995 579 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 BRD3Q15059 726 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 RPE65Q16518 533 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF549Q6P9A3 640 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF449Q6P9G9 518 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 CNSTQ6PJW8 725 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 NAPRTQ6XQN6 538 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 CAPN12Q6ZSI9 719 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 ADAMTS14Q8WXS8 1223 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 CCDC3Q9BQI4 270 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 OR52A5Q9H2C5 316 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 SLC17A6Q9P2U8 582 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 NFU1Q9UMS0 254 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 KNTC1P50748 2209 aa12.65□□□□□ -0.38
SMPD1-202ENST00000526280 TCRBV9S1A1TA0A576 114 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 KPNA5O15131 536 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 OPA1O60313 960 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 GPC4O75487 556 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 SLCO2B1O94956 709 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 VIPP01282 170 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 SLC35G4P0C7Q5 338 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 PREPP48147 710 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 CD151P48509 253 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 BIRC2Q13490 618 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 BOP1Q14137 746 aaKnown RBP12.64□□□□□ -0.39
SMPD1-202ENST00000526280 DHRS13Q6UX07 377 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 TRIM48Q8IWZ4 208 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
SMPD1-202ENST00000526280 ASZ1Q8WWH4 475 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 TMEM159Q96B96 161 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 SH3KBP1Q96B97 665 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 CXorf40BQ96DE9 158 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 RMDN2Q96LZ7 410 aa12.64□□□□□ -0.39
SMPD1-202ENST00000526280 INSM2Q96T92 566 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms