RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TRMT112Q9UI30 125 aaKnown RBP3.82□□□□□ -1.8
CD44-219ENST00000525685 SIX4Q9UIU6 781 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 KCNS2Q9ULS6 477 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 NENFQ9UMX5 172 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 KLHL20Q9Y2M5 609 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 PCDHGB1Q9Y5G3 927 aa3.82□□□□□ -1.8
CD44-219ENST00000525685 TAF1P21675 1872 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 DUOX1Q9NRD9 1551 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 KIF16BQ96L93 1317 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 SAA2-SAA4A0A096LPE2 208 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 A0A0G2JPF8 293 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PLSCR5A0PG75 271 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CLEC18AA5D8T8 446 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 GOLGA6L9A6NEM1 432 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 HNRNPCL3B7ZW38 293 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PCCAP05165 728 aaPredicted RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 HNRNPCL4P0DMR1 293 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 ZNF12P17014 697 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 ANXA7P20073 488 aaKnown RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 SAT1P21673 171 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 COMPP49747 757 aaPredicted RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 PDLIM4P50479 330 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 TAS2R40P59535 323 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CREB5Q02930 508 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 GRSF1Q12849 480 aaKnown RBP eCLIP3.81□□□□□ -1.8
CD44-219ENST00000525685 DLG1Q12959 904 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PRKG2Q13237 762 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 SNTA1Q13424 505 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CUL4AQ13619 759 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 KEAP1Q14145 624 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 GCKRQ14397 625 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 OASLQ15646 514 aaKnown RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 KIF19Q2TAC6 998 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 ZNF805Q5CZA5 627 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 FAM69BQ5VUD6 431 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 HACE1Q8IYU2 909 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PCDH20Q8N6Y1 951 aaKnown RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CLEC18CQ8NCF0 446 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CCDC191Q8NCU4 936 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 OR1J2Q8NGS2 313 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 HMGCLL1Q8TB92 370 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 HM13Q8TCT9 377 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 WFIKKN2Q8TEU8 576 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 ZNF622Q969S3 477 aaKnown RBP eCLIP3.81□□□□□ -1.8
CD44-219ENST00000525685 FAM120BQ96EK7 910 aaKnown RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 GRAMD2BQ96HH9 432 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PGAM5Q96HS1 289 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 SMC6Q96SB8 1091 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 GAD1Q99259 594 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CCDC68Q9H2F9 335 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 KCNN2Q9H2S1 579 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PIGMQ9H3S5 423 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 SEBOXQ9HB31 216 aaPredicted RBP3.81□□□□□ -1.8
CD44-219ENST00000525685 FBXL17Q9UF56 701 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 TINAGQ9UJW2 476 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 FBXW11Q9UKB1 542 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 FBXL2Q9UKC9 423 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 POU2F3Q9UKI9 436 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 GPR34Q9UPC5 381 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 TNNQ9UQP3 1299 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 AMDHD2Q9Y303 409 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 PCDHAC2Q9Y5I4 1007 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 CHD4Q14839 1912 aa3.81□□□□□ -1.8
CD44-219ENST00000525685 hCG_1807616A0A1W2PRN6 198 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 CPED1A4D0V7 1026 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 HNRNPCL2B2RXH8 293 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 ACOT8O14734 319 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 OGG1O15527 345 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 DAB1O75553 588 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 RFPL2O75678 378 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 TPPPO94811 219 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 KCNK5O95279 499 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 MATR3P43243 847 aaKnown RBP eCLIP3.8□□□□□ -1.8
CD44-219ENST00000525685 PRELPP51888 382 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 MFAP4P55083 255 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 NLRP5P59047 1200 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 TAS2R38P59533 333 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 KRT33BQ14525 404 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 MYLK3Q32MK0 819 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 CFAP58Q5T655 872 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 SPATA1Q5VX52 437 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 FRG2Q64ET8 278 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 KIAA0930Q6ICG6 404 aaPredicted RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 CAPRIN2Q6IMN6 1127 aaKnown RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 CFAP161Q6P656 301 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 OLFM4Q6UX06 510 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 RBM23Q86U06 439 aaKnown RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 RNF113BQ8IZP6 322 aaKnown RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 LILRB1Q8NHL6 650 aaPredicted RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 GSDMBQ8TAX9 411 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 PPP4R1Q8TF05 950 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 CDCA5Q96FF9 252 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 IGSF21Q96ID5 467 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 QRFPRQ96P65 431 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 ZNF385AQ96PM9 386 aaKnown RBP3.8□□□□□ -1.8
CD44-219ENST00000525685 DUX5Q96PT3 197 aa3.8□□□□□ -1.8
CD44-219ENST00000525685 NUDT16L1Q9BRJ7 211 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms