RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CWH43Q9H720 699 aa17.6■□□□□ 0.41
IKBKB-228ENST00000523517 GKN1Q9NS71 199 aa17.6■□□□□ 0.41
IKBKB-228ENST00000523517 ZMYM5Q9UJ78 669 aa17.6■□□□□ 0.41
IKBKB-228ENST00000523517 PCDHB1Q9Y5F3 818 aa17.6■□□□□ 0.41
IKBKB-228ENST00000523517 SLC30A1Q9Y6M5 507 aa17.6■□□□□ 0.41
IKBKB-228ENST00000523517 GOLGA8CPA6NN73 597 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 RAD51BO15315 384 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 GMNNO75496 209 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 STC2O76061 302 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 KCNH1O95259 989 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ALPLP05186 524 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PCNAP12004 261 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 NFKBIAP25963 317 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 HMOX2P30519 316 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 TWF1Q12792 350 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PLA2G4EQ3MJ16 856 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PRSS55Q6UWB4 352 aaPredicted RBP17.59■□□□□ 0.41
IKBKB-228ENST00000523517 TAS1R1Q7RTX1 841 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 EGFL6Q8IUX8 553 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PPP3R2Q96LZ3 170 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 CCDC115Q96NT0 180 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 CASD1Q96PB1 797 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 TUBA1CQ9BQE3 449 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 NSUN3Q9H649 340 aaKnown RBP17.59■□□□□ 0.41
IKBKB-228ENST00000523517 SMPD4Q9NXE4 827 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ZNF711Q9Y462 761 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 CCL27Q9Y4X3 112 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 NT5C1B-RDH14C9J2C7 533 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 DFNA5O60443 496 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PRAMEF12O95522 483 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 THRBP10828 461 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 SLC2A4P14672 509 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 TCF3P15923 654 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ELK4P28324 431 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 SHMT2P34897 504 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 POLR2IP36954 125 aaKnown RBP17.59■□□□□ 0.41
IKBKB-228ENST00000523517 MTHFRP42898 656 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 HSPA7P48741 367 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PTRHD1Q6GMV3 140 aaKnown RBP17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ELMSAN1Q6PJG2 1045 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ZNF773Q6PK81 442 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ANKS3Q6ZW76 656 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 ITIH5Q86UX2 942 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 STK32CQ86UX6 486 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 CLEC4FQ8N1N0 589 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 CHCHD4Q8N4Q1 142 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 EID2BQ96D98 161 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 CNDP2Q96KP4 475 aaKnown RBP17.59■□□□□ 0.41
IKBKB-228ENST00000523517 GPR63Q9BZJ6 419 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 VAPAQ9P0L0 249 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 LHX3Q9UBR4 397 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 PCDHB9Q9Y5E1 797 aa17.59■□□□□ 0.41
IKBKB-228ENST00000523517 A0A1W2PPW3 197 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 CPNE6O95741 557 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 C16orf72Q14CZ0 275 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 ADGRF1Q5T601 910 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 CERS6Q6ZMG9 384 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 PDZD8Q8NEN9 1154 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 SLC13A3Q8WWT9 602 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 THAP11Q96EK4 314 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 CCDC97Q96F63 343 aaPredicted RBP17.58■□□□□ 0.41
IKBKB-228ENST00000523517 ZBTB18Q99592 522 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 UGT2B28Q9BY64 529 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 NAA50Q9GZZ1 169 aaKnown RBP17.58■□□□□ 0.41
IKBKB-228ENST00000523517 GORASP2Q9H8Y8 452 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 CARS2Q9HA77 564 aaKnown RBP17.58■□□□□ 0.41
IKBKB-228ENST00000523517 ELOVL2Q9NXB9 296 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 PCDHB7Q9Y5E2 793 aa17.58■□□□□ 0.41
IKBKB-228ENST00000523517 MAGED1Q9Y5V3 778 aaPredicted RBP17.58■□□□□ 0.41
IKBKB-228ENST00000523517 SH3PXD2BA1X283 911 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 TRIM64BA6NI03 449 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 TAPBPO15533 448 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 ADAM12O43184 909 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 FZD6O60353 706 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 GLUD1P00367 558 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 MSH3P20585 1137 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 RPL38P63173 70 aaKnown RBP17.58■□□□□ 0.4
IKBKB-228ENST00000523517 GRSF1Q12849 480 aaKnown RBP eCLIP17.58■□□□□ 0.4
IKBKB-228ENST00000523517 ELAVL2Q12926 359 aaKnown RBP17.58■□□□□ 0.4
IKBKB-228ENST00000523517 FAM117BQ6P1L5 589 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 OR2T12Q8NG77 320 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 FIG4Q92562 907 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 TTPALQ9BTX7 342 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 CIPCQ9C0C6 399 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 RHBDL2Q9NX52 303 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 VWA8A3KMH1 1905 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 CEP350Q5VT06 3117 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 FRMPD3Q5JV73 1810 aa17.58■□□□□ 0.4
IKBKB-228ENST00000523517 B4GAT1O43505 415 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 FOXD2O60548 495 aaPredicted RBP17.57■□□□□ 0.4
IKBKB-228ENST00000523517 GUCA1CO95843 209 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 IRF1P10914 325 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 ELNP15502 786 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 CTPS1P17812 591 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 EEF1B2P24534 225 aaKnown RBP17.57■□□□□ 0.4
IKBKB-228ENST00000523517 HMGCLP35914 325 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 CBX2Q14781 532 aaPredicted RBP17.57■□□□□ 0.4
IKBKB-228ENST00000523517 FGD3Q5JSP0 725 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 RNF180Q86T96 592 aa17.57■□□□□ 0.4
IKBKB-228ENST00000523517 TMEM173Q86WV6 379 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms