RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 PWWP2AQ96N64 755 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 PANX3Q96QZ0 392 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 EPB41L5Q9HCM4 733 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 ATXN7L1Q9ULK2 861 aaPredicted RBP25.42■■□□□ 1.66
DDR1-279ENST00000515529 HEBP2Q9Y5Z4 205 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 IGHV1OR21-1A0A087WYE8 117 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 TMX2-CTNND1H3BSU7 103 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 DUX1O43812 170 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 CPNE6O95741 557 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 MTHFD1P11586 935 aaKnown RBP25.41■■□□□ 1.66
DDR1-279ENST00000515529 ITGB6P18564 788 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 RPS3P23396 243 aaKnown RBP eCLIP25.41■■□□□ 1.663e-6■■■□□ 18.1
DDR1-279ENST00000515529 EPHA4P54764 986 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 PLOD1Q02809 727 aaPredicted RBP25.41■■□□□ 1.66
DDR1-279ENST00000515529 BRD3Q15059 726 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 CLPPQ16740 277 aaPredicted RBP25.41■■□□□ 1.66
DDR1-279ENST00000515529 ISXQ2M1V0 245 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 TMEM26Q6ZUK4 368 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 CENPUQ71F23 418 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 KCNMB4Q86W47 210 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 CILP2Q8IUL8 1156 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 LILRA3Q8N6C8 439 aaPredicted RBP25.41■■□□□ 1.66
DDR1-279ENST00000515529 TMEM159Q96B96 161 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 GRAMD1AQ96CP6 724 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 TMEM74Q96NL1 305 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 CARD6Q9BX69 1037 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 UCK1Q9HA47 277 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 INTS10Q9NVR2 710 aaKnown RBP25.41■■□□□ 1.66
DDR1-279ENST00000515529 PTPRBP23467 1997 aa25.41■■□□□ 1.66
DDR1-279ENST00000515529 LILRA5A6NI73 299 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 PREPP48147 710 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 TMED2Q15363 201 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 USP53Q70EK8 1073 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 CEP112Q8N8E3 955 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 RMDN2Q96LZ7 410 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 DPYSL5Q9BPU6 564 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 STRADBQ9C0K7 418 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 EPB41L1Q9H4G0 881 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 SLC40A1Q9NP59 571 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 PCDHB1Q9Y5F3 818 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 CFAP20Q9Y6A4 193 aaKnown RBP25.4■■□□□ 1.66
DDR1-279ENST00000515529 COLEC10Q9Y6Z7 277 aa25.4■■□□□ 1.66
DDR1-279ENST00000515529 H3BMM5 538 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 CASC3O15234 703 aaKnown RBP25.39■■□□□ 1.66
DDR1-279ENST00000515529 CD1CP29017 333 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 FMO4P31512 558 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 HSP90AA5PQ58FG0 334 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 NKAIN2Q5VXU1 208 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 ANKMY2Q8IV38 441 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 MMGT1Q8N4V1 131 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 SPDYE1Q8NFV5 336 aaPredicted RBP25.39■■□□□ 1.66
DDR1-279ENST00000515529 GSDMBQ8TAX9 411 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 LPGAT1Q92604 370 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 INSM2Q96T92 566 aaPredicted RBP25.39■■□□□ 1.66
DDR1-279ENST00000515529 LRRC1Q9BTT6 524 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 P2RY12Q9H244 342 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 CCDC68Q9H2F9 335 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 RDH14Q9HBH5 336 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 PPANQ9NQ55 473 aaKnown RBP25.39■■□□□ 1.66
DDR1-279ENST00000515529 IARS2Q9NSE4 1012 aaKnown RBP25.39■■□□□ 1.66
DDR1-279ENST00000515529 CRYL1Q9Y2S2 319 aa25.39■■□□□ 1.66
DDR1-279ENST00000515529 TP73O15350 636 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 ESR1P03372 595 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 APOA4P06727 396 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 AMD1P17707 334 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 NDUFS1P28331 727 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 CD151P48509 253 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 PLTPP55058 493 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 CSE1LP55060 971 aaKnown RBP25.38■■□□□ 1.65
DDR1-279ENST00000515529 INHBCP55103 352 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 SLC7A5Q01650 507 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 PLCL1Q15111 1095 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 IGDCC3Q8IVU1 814 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 ZBED8Q8IZ13 594 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 TBC1D10AQ9BXI6 508 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 FOXP3Q9BZS1 431 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 OR52A5Q9H2C5 316 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 GRHL1Q9NZI5 618 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 TEX264Q9Y6I9 313 aa25.38■■□□□ 1.65
DDR1-279ENST00000515529 IQCF5A8MTL0 148 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 KPNA5O15131 536 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 ERVK-10P10266 1014 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 SLC1A2P43004 574 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 CTBP1Q13363 440 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 GPR18Q14330 331 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 ZNF658BQ4V348 819 aaPredicted RBP25.37■■□□□ 1.65
DDR1-279ENST00000515529 PHF19Q5T6S3 580 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 CAPRIN2Q6IMN6 1127 aaKnown RBP25.37■■□□□ 1.65
DDR1-279ENST00000515529 NAPRTQ6XQN6 538 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 UNC5AQ6ZN44 842 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 PDZD3Q86UT5 571 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 DENND6AQ8IWF6 608 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 KRT222Q8N1A0 295 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 FBXO36Q8NEA4 188 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 ASZ1Q8WWH4 475 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 NCSTNQ92542 709 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 NXPE2Q96DL1 559 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 ATXN7L3BQ96GX2 97 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 NUDT22Q9BRQ3 303 aa25.37■■□□□ 1.65
DDR1-279ENST00000515529 FBXO6Q9NRD1 293 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms