RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RFPL1O75677 317 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 PIAS2O75928 621 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 TRIM16O95361 564 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 CER1O95813 267 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 CFIP05156 583 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 MPOP05164 745 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 APOA4P06727 396 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 COL6A2P12110 1019 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF37AP17032 561 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ABCG1P45844 678 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 MAPK9P45984 424 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC12A2P55011 1212 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 CTBSQ01459 385 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ILF3Q12906 894 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ELOCQ15369 112 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SHBQ15464 509 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 LPAL2Q16609 132 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 CHST15Q7LFX5 561 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 KANSL1Q7Z3B3 1105 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 NRROSQ86YC3 692 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 CEP97Q8IW35 865 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC22A15Q8IZD6 547 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 BEND7Q8N7W2 519 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 GIMAP7Q8NHV1 300 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ELMO1Q92556 727 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 MRRFQ96E11 262 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ATXN7L3BQ96GX2 97 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SH3GL2Q99962 352 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 LRRC61Q9BV99 259 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 NUSAP1Q9BXS6 441 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 GSDMCQ9BYG8 508 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 TMEM168Q9H0V1 697 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 COG4Q9H9E3 785 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SYTL2Q9HCH5 934 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SNX15Q9NRS6 342 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 DNAJC28Q9NX36 388 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SENP1Q9P0U3 644 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 TRMT6Q9UJA5 497 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 GMEB2Q9UKD1 530 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 GPSM3Q9Y4H4 160 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 ST14Q9Y5Y6 855 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 ARID1BQ8NFD5 2236 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 A0A087X1B8 175 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 MED19A0JLT2 244 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 A6NCN8 305 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 IQCF5A8MTL0 148 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 PATE3B3GLJ2 98 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 LMO7DNF2Z398 122 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 AGPSO00116 658 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 TPP1O14773 563 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 PCDHGA12O60330 932 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 TSPAN12O95859 305 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC35E2BP0CK96 405 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 MPC1LP0DKB6 136 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 ACP5P13686 325 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CTSEP14091 401 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 IDSP22304 550 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 DGKAP23743 735 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CCNFP41002 786 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 SLCO1A2P46721 670 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CSRP2Q16527 193 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 INSCQ1MX18 579 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 RSPO4Q2I0M5 234 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 HLA-BQ31612 363 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 KRT71Q3SY84 523 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CEP85LQ5SZL2 805 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 ABRAXAS1Q6UWZ7 409 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 SH2D5Q6ZV89 423 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 RASGRP3Q8IV61 690 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CYP4X1Q8N118 509 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 NKAPQ8N5F7 415 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF548Q8NEK5 533 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 TMEM159Q96B96 161 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC30A3Q99726 388 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 STMN4Q9H169 189 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 OR52A5Q9H2C5 316 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 ACBD3Q9H3P7 528 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 TM7SF3Q9NS93 570 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 KLC4Q9NSK0 619 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 MKS1Q9NXB0 559 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 DLL3Q9NYJ7 618 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 GALPQ9UBC7 116 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CTNNAL1Q9UBT7 734 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 MOSPD1Q9UJG1 213 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 CDV3Q9UKY7 258 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 PRKAB1Q9Y478 270 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 PCDHGB2Q9Y5G2 931 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 ACTL7BQ9Y614 415 aa11.74□□□□□ -0.53
PDLIM5-220ENST00000514830 MYO15AQ9UKN7 3530 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 OR5K4A6NMS3 321 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 AQP9O43315 295 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 MATN4O95460 622 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 C2P06681 752 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms