RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SNRNP200O75643 2136 aaKnown RBP12.98□□□□□ -0.33
RNF4-215ENST00000511843 TCRBV7S3A2A0A539 114 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 HEATR9A2RTY3 570 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 B4E171 279 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 OR1I1O60431 355 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 GAS8O95995 478 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 GOT2P00505 430 aaKnown RBP12.98□□□□□ -0.33
RNF4-215ENST00000511843 PRB1P04280 392 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 PSMA3P25788 255 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 PDHA2P29803 388 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 TSPAN7P41732 249 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 ARCN1P48444 511 aaKnown RBP12.98□□□□□ -0.33
RNF4-215ENST00000511843 UCNP55089 124 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 MC2RQ01718 297 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 GSE1Q14687 1217 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 BRD3Q15059 726 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 ZNF658BQ4V348 819 aaPredicted RBP12.98□□□□□ -0.33
RNF4-215ENST00000511843 CCDC81Q6ZN84 652 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 DTX1Q86Y01 620 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 HM13Q8TCT9 377 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 MAIP1Q8WWC4 291 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 LINC00615Q96LM1 132 aaPredicted RBP12.98□□□□□ -0.33
RNF4-215ENST00000511843 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 COG4Q9H9E3 785 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 CHRAC1Q9NRG0 131 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 SIDT1Q9NXL6 827 aaKnown RBP12.98□□□□□ -0.33
RNF4-215ENST00000511843 SLC24A2Q9UI40 661 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 ACSL5Q9ULC5 683 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 TCAF1Q9Y4C2 921 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 PCDHGA3Q9Y5H0 932 aa12.98□□□□□ -0.33
RNF4-215ENST00000511843 TEX51A0A1B0GUA7 166 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 K7ENP7 123 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 ADRA1DP25100 572 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 FOXM1Q08050 763 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 DCAF12Q5T6F0 453 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 CACHD1Q5VU97 1274 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 CAPRIN2Q6IMN6 1127 aaKnown RBP12.97□□□□□ -0.33
RNF4-215ENST00000511843 INO80CQ6PI98 192 aaPredicted RBP12.97□□□□□ -0.33
RNF4-215ENST00000511843 PCSK4Q6UW60 755 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 ZNF534Q76KX8 674 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 LDB1Q86U70 411 aaPredicted RBP12.97□□□□□ -0.33
RNF4-215ENST00000511843 RBM12BQ8IXT5 1001 aaKnown RBP12.97□□□□□ -0.33
RNF4-215ENST00000511843 PHC3Q8NDX5 983 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 OR6P1Q8NGX9 317 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 ELMO2Q96JJ3 720 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 PPM1MQ96MI6 270 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 RANBP9Q96S59 729 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 DDA1Q9BW61 102 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 OR52A5Q9H2C5 316 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 JRKLQ9Y4A0 524 aa12.97□□□□□ -0.33
RNF4-215ENST00000511843 IGHV5-51A0A0C4DH38 117 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 OR6C74A6NCV1 312 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 USP27XA6NNY8 438 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 STMND1H3BQB6 276 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 ANKRD34CP0C6C1 535 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 ITGB6P18564 788 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 MGAT1P26572 445 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 NMBRP28336 390 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 CSE1LP55060 971 aaKnown RBP12.96□□□□□ -0.33
RNF4-215ENST00000511843 ACVR1Q04771 509 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 KRT33BQ14525 404 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 MANEAQ5SRI9 462 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 AFTPHQ6ULP2 937 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 CES3Q6UWW8 571 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 CERS6Q6ZMG9 384 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 PPHLN1Q8NEY8 458 aaKnown RBP12.96□□□□□ -0.33
RNF4-215ENST00000511843 OR4L1Q8NH43 312 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 HEXDCQ8WVB3 486 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 NKD1Q969G9 470 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 FERD3LQ96RJ6 166 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 UBL7Q96S82 380 aaPredicted RBP12.96□□□□□ -0.33
RNF4-215ENST00000511843 MAP3K3Q99759 626 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 ZNF768Q9H5H4 540 aaKnown RBP12.96□□□□□ -0.33
RNF4-215ENST00000511843 KIR3DX1Q9H7L2 352 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 EIF2B3Q9NR50 452 aaKnown RBP12.96□□□□□ -0.33
RNF4-215ENST00000511843 SYBUQ9NX95 663 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 MARCH4Q9P2E8 410 aaPredicted RBP12.96□□□□□ -0.33
RNF4-215ENST00000511843 PCDHB11Q9Y5F2 797 aa12.96□□□□□ -0.33
RNF4-215ENST00000511843 SPTBP11277 2137 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 C17orf113A0A1B0GUU1 675 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
RNF4-215ENST00000511843 ZNF185O15231 689 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 AVILO75366 819 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 ZNF28P17035 718 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 RAB15P59190 212 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 CYP4F2P78329 520 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 PRAMEP78395 509 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 GPS1Q13098 491 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 PRKG2Q13237 762 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 BOP1Q14137 746 aaKnown RBP12.95□□□□□ -0.34
RNF4-215ENST00000511843 ANKRD22Q5VYY1 191 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 TIPARPQ7Z3E1 657 aaKnown RBP12.95□□□□□ -0.34
RNF4-215ENST00000511843 PRSS42Q7Z5A4 293 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 UNC5BQ8IZJ1 945 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 311.2 ms