RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 RASGEF1BQ0VAM2 473 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SLC1A5Q15758 541 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PAOXQ6QHF9 649 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 GDPD1Q8N9F7 314 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 HJURPQ8NCD3 748 aaPredicted RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 SLC2A14Q8TDB8 520 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TWIST2Q8WVJ9 160 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 MAFIPQ8WZ33 124 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PRICKLE1Q96MT3 831 aaPredicted RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 SLC29A3Q9BZD2 475 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TTYH3Q9C0H2 523 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 RDH8Q9NYR8 311 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PTPRMP28827 1452 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ANXA2P07355 339 aaKnown RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 IL3P08700 152 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 M6PRP20645 277 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CHRNA5P30532 468 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CD97P48960 835 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 AP1S1P61966 158 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 HNRNPLP14866 589 aaKnown RBP eCLIP8.27□□□□□ -1.091e-8■■■■■ 35.8
HTT-208ENST00000510626 THOP1P52888 689 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 GBX2P52951 348 aaPredicted RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 ERVK-8P63133 956 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TCEAL1Q15170 157 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 FSTL4Q6MZW2 842 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 EPGNQ6UW88 154 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TSPAN1O60635 241 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 LSM3P62310 102 aaKnown RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 GRB14Q14449 540 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 CYS1Q717R9 158 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TRPM4Q8TD43 1214 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 BCL2L14Q9BZR8 327 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SPTBP11277 2137 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 LRRC14BA6NHZ5 514 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 KAT7O95251 611 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 PTGIRP43119 386 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 MAPK10P53779 464 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 POU4F2Q12837 409 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 XKR6Q5GH73 641 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 DCP2Q8IU60 420 aaKnown RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 TOMM5Q8N4H5 51 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 ERVK-5Q9HDB9 667 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 AXIN2Q9Y2T1 843 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SLIT3O75094 1523 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SLC7A4O43246 635 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 XYLBO75191 536 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TBX10O75333 385 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 MAPK12P53778 367 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 MYBPC1Q00872 1141 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 NFIXQ14938 502 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 ATP6AP1Q15904 470 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 MON1AQ86VX9 555 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 FAM98AQ8NCA5 519 aaKnown RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 SDCBP2Q9H190 292 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 FAIMQ9NVQ4 179 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TBC1D24Q9ULP9 559 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 KIF13AQ9H1H9 1805 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 CXCR6O00574 342 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 CKBP12277 381 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 PRPS1L1P21108 318 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 IQSEC1Q6DN90 963 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 PGBD2Q6P3X8 592 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 STON2Q8WXE9 905 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SEMA4DQ92854 862 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 RERGQ96A58 199 aaPredicted RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 ZNF282Q9UDV7 671 aaPredicted RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 DNAJB13P59910 316 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TMEM199Q8N511 208 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 OR4C6Q8NH72 309 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 KCTD4Q8WVF5 259 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TTC3P53804 2025 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 A0A1B0GVM2 712 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SH3D21A4FU49 640 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TCAF2A6NFQ2 919 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 IFI44LQ53G44 452 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 ARL13AQ5H913 290 aaPredicted RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 TRMT11Q7Z4G4 463 aaKnown RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 SPPL2CQ8IUH8 684 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SLC9A6Q92581 669 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 ZBED3Q96IU2 234 aaPredicted RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 LENG8Q96PV6 779 aaPredicted RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 RTFDC1Q9BY42 306 aaPredicted RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 GLOD4Q9HC38 313 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 LACTBL1A8MY62 500 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 RASAL1O95294 804 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 DNTTP04053 509 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 GLUD2P49448 558 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 MFSD10Q14728 455 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 TEX44Q53QW1 395 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 LCLAT1Q6UWP7 414 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 C6orf89Q6UWU4 347 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 ZYG11BQ9C0D3 744 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 POLR2J3Q9H1A7 115 aaKnown RBP8.26□□□□□ -1.09
HTT-208ENST00000510626 COQ10BQ9H8M1 238 aa8.26□□□□□ -1.09
HTT-208ENST00000510626 GPRC5CQ9NQ84 441 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms