RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 I3L4J1 428 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TXNDC9O14530 226 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TBX3O15119 743 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ACOX3O15254 700 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CD3EAPO15446 510 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 AQP9O43315 295 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SULT1B1O43704 296 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 BUD23O43709 281 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM189A1O60320 539 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CCNT2O60583 730 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SNAP91O60641 907 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 KLHL41O60662 606 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 JRKO75564 520 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SULT1C4O75897 302 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 BAG2O95816 211 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 KRT18P05783 430 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CD48P09326 243 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SRGAP2BP0DMP2 458 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MCF2P10911 925 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 PCNAP12004 261 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 KRT13P13646 458 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC130P13994 396 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TSHRP16473 764 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 POLR2CP19387 275 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 PRKACBP22694 351 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 KLRC1P26715 233 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC5A2P31639 672 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 THBS4P35443 961 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 GNL1P36915 607 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 IL15P40933 162 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SERPINB10P48595 397 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FKBP3Q00688 224 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ECT2LQ008S8 904 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FOLH1Q04609 750 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 RAD51Q06609 339 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 COX10Q12887 443 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 STX3Q13277 289 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 COG2Q14746 738 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF846Q147U1 533 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TRIP10Q15642 601 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ALX1Q15699 326 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 NFE2Q16621 373 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MAPK6Q16659 721 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 LEXMQ3ZCV2 418 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ZBED5Q49AG3 693 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 KCTD21Q4G0X4 260 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CAVIN4Q5BKX8 364 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM83BQ5T0W9 1011 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 OGFRL1Q5TC84 451 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 AGAP7PQ5VUJ5 663 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ATG16L1Q676U5 607 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CENPPQ6IPU0 288 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 KRT80Q6KB66 452 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 C11orf63Q6NUN7 778 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ERAP2Q6P179 960 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 NPNTQ6UXI9 565 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 HACE1Q8IYU2 909 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CENPSQ8N2Z9 138 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC33Q8N5R6 958 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TMCO5AQ8N6Q1 288 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF548Q8NEK5 533 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TSPAN14Q8NG11 270 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FBXO25Q8TCJ0 367 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MGARPQ8TDB4 240 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 DTX3LQ8TDB6 740 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 GDPD5Q8WTR4 605 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 RFFLQ8WZ73 363 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM122AQ96E09 287 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 WDYHV1Q96HA8 205 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MAGED4Q96JG8 741 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 DDX50Q9BQ39 737 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 BCL7BQ9BQE9 202 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MXD3Q9BW11 206 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 OSBPL11Q9BXB4 747 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 YTHDF1Q9BYJ9 559 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 RAB34Q9BZG1 259 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 DCLK3Q9C098 648 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 EHD1Q9H4M9 534 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ANKHQ9HCJ1 492 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 OLFML3Q9NRN5 406 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 FAM207AQ9NSI2 230 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 PNPLA3Q9NST1 481 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 HEY2Q9UBP5 337 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 DBNLQ9UJU6 430 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC8A2Q9UPR5 921 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 NOSIPQ9Y314 301 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MRPL11Q9Y3B7 192 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 TIMM22Q9Y584 194 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 HEY1Q9Y5J3 304 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 COMMD10Q9Y6G5 202 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 MYH10P35580 1976 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ATAD5Q96QE3 1844 aa4.56□□□□□ -1.68
PDLIM5-211ENST00000508531 ASTN2O75129 1339 aaPredicted RBP4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ARPC4-TTLL3A0A0A6YYG9 625 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 GSTTP1A0A1W2PQM5 241 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ISPDA4D126 451 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 ARHGEF35A5YM69 484 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 CD8B2A6NJW9 211 aa4.55□□□□□ -1.68
PDLIM5-211ENST00000508531 AP3B1O00203 1094 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms