RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TRIP11Q15643 1979 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCN1AP35498 2009 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSC2P49815 1807 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TANC1Q9C0D5 1861 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 EVPLQ92817 2033 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PNMA8CA0A1B0GUJ8 204 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 LOC100130705A0A1B0GUX0 176 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 LOC285095A0A1B0GVY8 99 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ELOVL7A1L3X0 281 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MBLAC1A4D2B0 266 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 E9PAM4 449 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 H3BMM5 538 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 I6L893 689 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 M0QZ92 97 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC28A1O00337 649 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC1A7O00341 560 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 BCKDKO14874 412 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 AURKAO14965 403 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RGS14O43566 566 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 FOXD2O60548 495 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADAM23O75077 832 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NDUFS3O75489 264 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ECI2O75521 394 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RSL1D1O76021 490 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRKD3O94806 890 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARHGEF15O94989 841 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NADKO95544 446 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NDST3O95803 873 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLIC3O95833 236 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 GOT2P00505 430 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CYP11A1P05108 521 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 IL6P05231 212 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPLP2P05387 115 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 THP07101 528 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RETP07949 1114 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CELA2BP08218 269 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SMIM10L2AP0DMW4 78 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SMIM10L2BP0DMW5 78 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NCK1P16333 377 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTPN2P17706 415 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSPAN8P19075 237 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 HRH2P25021 359 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPL10P27635 214 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ELK4P28324 431 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SHMT2P34897 504 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 POLR2IP36954 125 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PBX3P40426 434 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD86P42081 329 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAGEA10P43363 369 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CHRNA4P43681 627 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 YAP1P46937 504 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RXRGP48443 463 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 GSSP48637 474 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TTPAP49638 278 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 STC1P52823 247 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPP5CP53041 499 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PGGT1BP53609 377 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MLLT6P55198 1093 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 HUNKP57058 714 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 YBEYP58557 167 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 DEFA1P59665 94 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 DEFA3P59666 94 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSPY1Q01534 308 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SOX4Q06945 474 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 IL10RBQ08334 325 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 FADDQ13158 208 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNAB2Q13303 367 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 EIF4EBP2Q13542 120 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 KEAP1Q14145 624 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPCS2Q15005 226 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CYP2A13Q16696 494 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 HIST2H2ACQ16777 129 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TYSND1Q2T9J0 566 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PLEKHG6Q3KR16 790 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZIK1Q3SY52 487 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PARP15Q460N3 678 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TIGD2Q4W5G0 525 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAGE3Q5JUK9 113 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 C6orf136Q5SQH8 315 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 UBXN11Q5T124 520 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 CACHD1Q5VU97 1274 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF691Q5VV52 312 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATG9BQ674R7 924 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TWF2Q6IBS0 349 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 SULT1C3Q6IMI6 304 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 METTL2BQ6P1Q9 378 aaKnown RBP4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 MSANTD2Q6P1R3 559 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF549Q6P9A3 640 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM207Q6UWW9 146 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 PLEKHG7Q6ZR37 379 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARHGAP36Q6ZRI8 547 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 RNF165Q6ZSG1 346 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 AKAP14Q86UN6 197 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 P2RY8Q86VZ1 359 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 NLRP8Q86W28 1048 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPSM1Q86YR5 675 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARMC8Q8IUR7 673 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 KIAA2013Q8IYS2 634 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 LGI2Q8N0V4 545 aa4.89□□□□□ -1.63
HMGB3P16-201ENST00000508037 STK40Q8N2I9 435 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms