RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CLPPQ16740 277 aaPredicted RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 KCTD19Q17RG1 926 aaPredicted RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 DNAJC21Q5F1R6 531 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 RNASEH2BQ5TBB1 312 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 IZUMO3Q5VZ72 239 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 METRNLQ641Q3 311 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 RBM44Q6ZP01 1051 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 ZNF534Q76KX8 674 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 ZNF438Q7Z4V0 828 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 C11orf96Q7Z7L8 435 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 PIM3Q86V86 326 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 JAMLQ86YT9 394 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CCNJLQ8IV13 435 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 RBM12BQ8IXT5 1001 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 PIANPQ8IYJ0 282 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 PDIK1LQ8N165 341 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 DCBLD1Q8N8Z6 715 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 GABPB2Q8TAK5 448 aaPredicted RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 SLC37A2Q8TED4 501 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CXorf40BQ96DE9 158 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 MFSD3Q96ES6 412 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 SNF8Q96H20 258 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 AHCYL2Q96HN2 611 aaKnown RBP7.13□□□□□ -1.27
GYPB-206ENST00000506516 TMEM74Q96NL1 305 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 TCF12Q99081 682 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 NAT9Q9BTE0 207 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 TSSK1BQ9BXA7 367 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 TREX1Q9NSU2 369 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CATSPERZQ9NTU4 200 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 KCNK4Q9NYG8 393 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CDC23Q9UJX2 597 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 KLK13Q9UKR3 277 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 MAD1L1Q9Y6D9 718 aa7.13□□□□□ -1.27
GYPB-206ENST00000506516 CEP250Q9BV73 2442 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 FAM149AA5PLN7 773 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 A6NCN8 305 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 FIGNL2A6NMB9 653 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 IFRD1O00458 451 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 NTN3O00634 580 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 PPM1DO15297 605 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 B4GAT1O43505 415 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 CSO75390 466 aaKnown RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 USP1O94782 785 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 CPNE6O95741 557 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 TTC4O95801 387 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 EML2O95834 649 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 FTH1P02794 183 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 POLBP06746 335 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 SLC35G4P0C7Q5 338 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 PRSS56P0CW18 603 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 PRLHRP49683 370 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 DRG2P55039 364 aaKnown RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 OR1D5P58170 312 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 PLOD1Q02809 727 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 RPA4Q13156 261 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 THOC5Q13769 683 aaKnown RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 NFE2L1Q14494 772 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 KRT33BQ14525 404 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 NR1D2Q14995 579 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 CLCA4Q14CN2 919 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 DBN1Q16643 649 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 ISXQ2M1V0 245 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 AMZ1Q400G9 498 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 ANKRD20A4Q4UJ75 823 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 RNF187Q5TA31 235 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 C16orf46Q6P387 395 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 CES3Q6UWW8 571 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 PACS1Q6VY07 963 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 SPRED1Q7Z699 444 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 TMEM135Q86UB9 458 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 SFTPA2Q8IWL1 248 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 MPP5Q8N3R9 675 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 CLDN19Q8N6F1 224 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 OTUD6BQ8N6M0 293 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 OR10G6Q8NH81 332 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 KIF18AQ8NI77 898 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 HM13Q8TCT9 377 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 ZFPM2Q8WW38 1151 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 PATE1Q8WXA2 126 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 ZNF669Q96BR6 464 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 STAMBPL1Q96FJ0 436 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 SIGLEC10Q96LC7 697 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 DPYSL5Q9BPU6 564 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 TRIM31Q9BZY9 425 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 STRADBQ9C0K7 418 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 NRSN2Q9GZP1 204 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 EPB41L1Q9H4G0 881 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 UCK1Q9HA47 277 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 EPB41L5Q9HCM4 733 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 POT1Q9NUX5 634 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 AKAP7Q9P0M2 348 aaPredicted RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 EGFL7Q9UHF1 273 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 SNX24Q9Y343 169 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 UTP11Q9Y3A2 253 aaKnown RBP7.12□□□□□ -1.27
GYPB-206ENST00000506516 HEBP2Q9Y5Z4 205 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 RPS6KL1Q9Y6S9 549 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 COLEC10Q9Y6Z7 277 aa7.12□□□□□ -1.27
GYPB-206ENST00000506516 SPEGQ15772 3267 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms