RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SLC29A2Q14542 456 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 SLC30A9Q6PML9 568 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 C11orf96Q7Z7L8 435 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 SAP25Q8TEE9 199 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 AENQ8WTP8 325 aaKnown RBP19.68■□□□□ 0.74
CTSD-206ENST00000497544 BIRC8Q96P09 236 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 CPNE1Q99829 537 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 FUT8Q9BYC5 575 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 ACSS3Q9H6R3 686 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 PCDHGB2Q9Y5G2 931 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 PSAT1Q9Y617 370 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 COMMD10Q9Y6G5 202 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 IQCF5A8MTL0 148 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 E5RI56 91 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 LMO7DNF2Z398 122 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 YY2O15391 372 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 CELA2BP08218 269 aaPredicted RBP19.67■□□□□ 0.74
CTSD-206ENST00000497544 ABHD2P08910 425 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 CHRM3P20309 590 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 GP5P40197 560 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 C19orf57Q0VDD7 668 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 ILF2Q12905 390 aaKnown RBP19.67■□□□□ 0.74
CTSD-206ENST00000497544 CTSL3PQ5NE16 218 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 UBAP2Q5T6F2 1119 aaKnown RBP19.67■□□□□ 0.74
CTSD-206ENST00000497544 LVRNQ6Q4G3 990 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 NRROSQ86YC3 692 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 CFAP206Q8IYR0 622 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 KRT222Q8N1A0 295 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 SLC25A45Q8N413 288 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 FAM46DQ8NEK8 389 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 MYRIPQ8NFW9 859 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 OR2L2Q8NH16 312 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 HNRNPLLQ8WVV9 542 aaKnown RBP19.67■□□□□ 0.74
CTSD-206ENST00000497544 ELMO1Q92556 727 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 MRRFQ96E11 262 aaKnown RBP19.67■□□□□ 0.74
CTSD-206ENST00000497544 OSGEPL1Q9H4B0 414 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 FAM8A1Q9UBU6 413 aa19.67■□□□□ 0.74
CTSD-206ENST00000497544 FAM221BA6H8Z2 402 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 TPP1O14773 563 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 KPNA5O15131 536 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 FFAR2O15552 330 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 SNX2O60749 519 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 ERLIN1O75477 346 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 C1QAP02745 245 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 ALPPL2P10696 532 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 IDSP22304 550 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 CLCNKAP51800 687 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 SLC14A1Q13336 389 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 KLHL38Q2WGJ6 581 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 DEFB133Q30KQ1 61 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 GRTP1Q5TC63 336 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 ZC3HC1Q86WB0 502 aaKnown RBP19.66■□□□□ 0.74
CTSD-206ENST00000497544 CAVIN3Q969G5 261 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 CCDC77Q9BR77 488 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 AARSD1Q9BTE6 412 aaKnown RBP19.66■□□□□ 0.74
CTSD-206ENST00000497544 DPEP2Q9H4A9 486 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 TAAR2Q9P1P5 351 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 CORO1CQ9ULV4 474 aaPredicted RBP19.66■□□□□ 0.74
CTSD-206ENST00000497544 IKBKGQ9Y6K9 419 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 ACACAQ13085 2346 aa19.66■□□□□ 0.74
CTSD-206ENST00000497544 ARID1BQ8NFD5 2236 aaPredicted RBP19.66■□□□□ 0.74
CTSD-206ENST00000497544 CTIFO43310 598 aaKnown RBP19.65■□□□□ 0.74
CTSD-206ENST00000497544 NIPSNAP2O75323 286 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 SPRP35270 261 aaPredicted RBP19.65■□□□□ 0.74
CTSD-206ENST00000497544 ABCG1P45844 678 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 CSE1LP55060 971 aaKnown RBP19.65■□□□□ 0.74
CTSD-206ENST00000497544 DMPKQ09013 629 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 NFE2L1Q14494 772 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 EFTUD2Q15029 972 aaKnown RBP eCLIP19.65■□□□□ 0.744e-8■■■■■ 50.6
CTSD-206ENST00000497544 BRD3Q15059 726 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 ZNF549Q6P9A3 640 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 KANSL1Q7Z3B3 1105 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 GPATCH11Q8N954 259 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 HM13Q8TCT9 377 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 ATXN7L3BQ96GX2 97 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 DUSP23Q9BVJ7 150 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 RHOJQ9H4E5 214 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 SARS2Q9NP81 518 aaKnown RBP19.65■□□□□ 0.74
CTSD-206ENST00000497544 SPATS2LQ9NUQ6 558 aaKnown RBP19.65■□□□□ 0.74
CTSD-206ENST00000497544 ST14Q9Y5Y6 855 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 ASXL3Q9C0F0 2248 aa19.65■□□□□ 0.74
CTSD-206ENST00000497544 SPAARA0A1B0GVQ0 90 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 POC1B-GALNT4F8VUJ3 575 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 VPS26AO75436 327 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 APOA4P06727 396 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 INHBAP08476 426 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 CCR7P32248 378 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 UAP1Q16222 522 aaPredicted RBP19.64■□□□□ 0.73
CTSD-206ENST00000497544 INAVAQ3KP66 663 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 METRNLQ641Q3 311 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 FAM45BPQ6NSW5 357 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 UGT3A1Q6NUS8 523 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 OTOAQ7RTW8 1153 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 FAM45AQ8TCE6 357 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 LKAAEAR1Q8TD35 194 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 SETD7Q8WTS6 366 aaKnown RBP19.64■□□□□ 0.73
CTSD-206ENST00000497544 NDNQ99608 321 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 RBBP8Q99708 897 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 EPB41L4BQ9H329 900 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 NLGN3Q9NZ94 848 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms