RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 DUS1LQ6P1R4 473 aaKnown RBP19.03■□□□□ 0.64
HDAC4-212ENST00000495497 SPNS2Q8IVW8 549 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 CALML6Q8TD86 181 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 RMDN2Q96LZ7 410 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 RHOXF2Q9BQY4 288 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 FAM167BQ9BTA0 163 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 GNPTGQ9UJJ9 305 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 FBXO5Q9UKT4 447 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 ACSL5Q9ULC5 683 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 A0A1W2PQM1 296 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 FAM149AA5PLN7 773 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 KLHL33A6NCF5 533 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 PFDN6O15212 129 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 NIPSNAP2O75323 286 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 VIPP01282 170 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 RPLP0P05388 317 aaKnown RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 PNLIPP16233 465 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 SSTR1P30872 391 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 HALP42357 657 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 ABCG1P45844 678 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 FASLGP48023 281 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 AMZ1Q400G9 498 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 HES3Q5TGS1 186 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 CNSTQ6PJW8 725 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 ZNF438Q7Z4V0 828 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 SPRED1Q7Z699 444 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 TRIM48Q8IWZ4 208 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 PALM2Q8IXS6 379 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 LMNTD2Q8IXW0 634 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 C2CD4AQ8NCU7 369 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 FAM136AQ96C01 138 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 CXorf40BQ96DE9 158 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 C9orf72Q96LT7 481 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 SARS2Q9NP81 518 aaKnown RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 IMP3Q9NV31 184 aaKnown RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 INTS10Q9NVR2 710 aaKnown RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 GALPQ9UBC7 116 aa19.02■□□□□ 0.64
HDAC4-212ENST00000495497 GOLGA4Q13439 2230 aaKnown RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 ZFC3H1O60293 1989 aaKnown RBP19.02■□□□□ 0.64
HDAC4-212ENST00000495497 SLC35G4P0C7Q5 338 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 GABRB3P28472 473 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 MAGEA4P43358 317 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 SYTL3Q4VX76 610 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 TEDDM1Q5T9Z0 273 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 NKAIN2Q5VXU1 208 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 CAPRIN2Q6IMN6 1127 aaKnown RBP19.01■□□□□ 0.63
HDAC4-212ENST00000495497 ZNF549Q6P9A3 640 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 ERMP1Q7Z2K6 904 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 LRRC6Q86X45 466 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 GSDMBQ8TAX9 411 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 JPH3Q8WXH2 748 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-212ENST00000495497 C12orf66Q96MD2 445 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 SLC38A3Q99624 504 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 TBC1D10AQ9BXI6 508 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 OR52A5Q9H2C5 316 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 LRRN3Q9H3W5 708 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 KLK13Q9UKR3 277 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 ATXN7L1Q9ULK2 861 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-212ENST00000495497 WASF3Q9UPY6 502 aa19.01■□□□□ 0.63
HDAC4-212ENST00000495497 SLC5A10A0PJK1 596 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 LIN7AO14910 233 aaPredicted RBP19■□□□□ 0.63
HDAC4-212ENST00000495497 PIAS1O75925 651 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 MT-CO3P00414 261 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 GSTM1P09488 218 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 CDK4P11802 303 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 PKMP14618 531 aaKnown RBP19■□□□□ 0.63
HDAC4-212ENST00000495497 AOAHP28039 575 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 ECHS1P30084 290 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 LEPRP48357 1165 aaKnown RBP19■□□□□ 0.63
HDAC4-212ENST00000495497 GPX6P59796 221 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 GSTM4Q03013 218 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 HSPA14Q0VDF9 509 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 NR1D2Q14995 579 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 VRK3Q8IV63 474 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 CNTN4Q8IWV2 1026 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 TSSK1BQ9BXA7 367 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 STN1Q9H668 368 aaKnown RBP19■□□□□ 0.63
HDAC4-212ENST00000495497 KCNK4Q9NYG8 393 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 MOCS1Q9NZB8 636 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 PCDHB1Q9Y5F3 818 aa19■□□□□ 0.63
HDAC4-212ENST00000495497 SPTBN2O15020 2390 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 ASXL3Q9C0F0 2248 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 F8W8V4 182 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 NTN3O00634 580 aaPredicted RBP18.99■□□□□ 0.63
HDAC4-212ENST00000495497 AHSGP02765 367 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 ESR1P03372 595 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 MTHFD1P11586 935 aaKnown RBP18.99■□□□□ 0.63
HDAC4-212ENST00000495497 MAPK9P45984 424 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 ADARP55265 1226 aaKnown RBP18.99■□□□□ 0.63
HDAC4-212ENST00000495497 FRG1Q14331 258 aaKnown RBP18.99■□□□□ 0.63
HDAC4-212ENST00000495497 TEX35Q5T0J7 233 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 CDCP2Q5VXM1 449 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 USP53Q70EK8 1073 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 TMPRSS7Q7RTY8 843 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 TMPRSS9Q7Z410 1059 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 PHC3Q8NDX5 983 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 PANX3Q96QZ0 392 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 GFM1Q96RP9 751 aaKnown RBP18.99■□□□□ 0.63
HDAC4-212ENST00000495497 SCNM1Q9BWG6 230 aa18.99■□□□□ 0.63
HDAC4-212ENST00000495497 FOXP3Q9BZS1 431 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms