RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ANKRD20A2Q5SQ80 823 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 ANKRD20A1Q5TYW2 823 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 ANKRD20A3Q5VUR7 823 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 ITPRIPL1Q6GPH6 555 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 CAPRIN2Q6IMN6 1127 aaKnown RBP23.3■■□□□ 1.32
TTC3-224ENST00000494243 TCTN3Q6NUS6 607 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 FAM199XQ6PEV8 388 aaPredicted RBP23.3■■□□□ 1.32
TTC3-224ENST00000494243 DAAM2Q86T65 1068 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 CCDC170Q8IYT3 715 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 LILRA3Q8N6C8 439 aaPredicted RBP23.3■■□□□ 1.32
TTC3-224ENST00000494243 KIR3DX1Q9H7L2 352 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 FAM8A1Q9UBU6 413 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 EFR3BQ9Y2G0 817 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 PCDHA3Q9Y5H8 950 aa23.3■■□□□ 1.32
TTC3-224ENST00000494243 UBA6A0AVT1 1052 aaPredicted RBP23.29■■□□□ 1.32
TTC3-224ENST00000494243 KLHL33A6NCF5 533 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 OR6C74A6NCV1 312 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 RCCD1A6NED2 376 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 MKRN2OSH3BPM6 223 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 PSMB4P28070 264 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 CTNNA1P35221 906 aaKnown RBP23.29■■□□□ 1.32
TTC3-224ENST00000494243 PMS2P54278 862 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 SRSF1Q07955 248 aaKnown RBP eCLIP23.29■■□□□ 1.325e-7■■■■□ 19.4
TTC3-224ENST00000494243 KLRB1Q12918 225 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 LAMB3Q13751 1172 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 DENND5AQ6IQ26 1287 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 SARM1Q6SZW1 724 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 OR13C4Q8NGS5 318 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 RMDN2Q96LZ7 410 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 PPM1MQ96MI6 270 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 ACTL8Q9H568 366 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 TLK1Q9UKI8 766 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 AAR2Q9Y312 384 aaKnown RBP23.29■■□□□ 1.32
TTC3-224ENST00000494243 FLNCQ14315 2725 aa23.29■■□□□ 1.32
TTC3-224ENST00000494243 POLBP06746 335 aa23.28■■□□□ 1.32
TTC3-224ENST00000494243 ARL4DP49703 201 aa23.28■■□□□ 1.32
TTC3-224ENST00000494243 KPNA2P52292 529 aaKnown RBP23.28■■□□□ 1.32
TTC3-224ENST00000494243 SPA17Q15506 151 aa23.28■■□□□ 1.32
TTC3-224ENST00000494243 FBXO38Q6PIJ6 1188 aa23.28■■□□□ 1.32
TTC3-224ENST00000494243 OOSP2Q86WS3 158 aa23.28■■□□□ 1.32
TTC3-224ENST00000494243 PTPN13Q12923 2485 aa23.28■■□□□ 1.32
TTC3-224ENST00000494243 CLEC18AA5D8T8 446 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 PJA2O43164 708 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 RFPL1O75677 317 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 ZBTB11O95625 1053 aaPredicted RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 SLC35G4P0C7Q5 338 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 RBP3P10745 1247 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 ARCN1P48444 511 aaKnown RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 EIF3EP60228 445 aaKnown RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 TUBB4BP68371 445 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 TUBB2AQ13885 445 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 GPR19Q15760 415 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 CCDC181Q5TID7 509 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 CLEC18BQ6UXF7 455 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 ZNF517Q6ZMY9 492 aaPredicted RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 CDKL3Q8IVW4 592 aaPredicted RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 APLFQ8IW19 511 aaPredicted RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 CFAP206Q8IYR0 622 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 SLC38A9Q8NBW4 561 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 CLEC18CQ8NCF0 446 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 ZNF501Q96CX3 271 aaPredicted RBP23.27■■□□□ 1.32
TTC3-224ENST00000494243 FAM118BQ9BPY3 351 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 TUBB2BQ9BVA1 445 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 GPR87Q9BY21 358 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 OSBPL8Q9BZF1 889 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 KCND1Q9NSA2 647 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 PLAAQ9Y263 795 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 DUSP10Q9Y6W6 482 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 MAST4O15021 2626 aa23.27■■□□□ 1.32
TTC3-224ENST00000494243 KCNN4O15554 427 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 CRTAMO95727 393 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 PYGMP11217 842 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 PTPN4P29074 926 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 PTPN7P35236 360 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 PRLHRP49683 370 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 ZNF140P52738 457 aaPredicted RBP23.26■■□□□ 1.31
TTC3-224ENST00000494243 RPS18P62269 152 aaKnown RBP23.26■■□□□ 1.31
TTC3-224ENST00000494243 SEMA5AQ13591 1074 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 UBAP2LQ14157 1087 aaKnown RBP23.26■■□□□ 1.31
TTC3-224ENST00000494243 ASB18Q6ZVZ8 466 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 KLHDC8BQ8IXV7 354 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 CARFQ8N187 725 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 NXPE1Q8N323 547 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 OR4E2Q8NGC2 313 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 CCDC110Q8TBZ0 833 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 C19orf43Q9BQ61 176 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 TRIM55Q9BYV6 548 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 TRIM5Q9C035 493 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 FAM96AQ9H5X1 160 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 ARNT2Q9HBZ2 717 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 CRLS1Q9UJA2 301 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 BTRCQ9Y297 605 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 MAN2B2Q9Y2E5 1009 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 COLEC10Q9Y6Z7 277 aa23.26■■□□□ 1.31
TTC3-224ENST00000494243 SCRG1O75711 98 aa23.25■■□□□ 1.31
TTC3-224ENST00000494243 DNAJB5O75953 348 aa23.25■■□□□ 1.31
TTC3-224ENST00000494243 PDGFAP04085 211 aa23.25■■□□□ 1.31
TTC3-224ENST00000494243 POLR2CP19387 275 aaPredicted RBP23.25■■□□□ 1.31
TTC3-224ENST00000494243 TMPRSS15P98073 1019 aa23.25■■□□□ 1.31
TTC3-224ENST00000494243 GPS2Q13227 327 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms