RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PACS1Q6VY07 963 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 CERS6Q6ZMG9 384 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 CENPUQ71F23 418 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 PIANPQ8IYJ0 282 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 NAGSQ8N159 534 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZDHHC1Q8WTX9 485 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 PATE1Q8WXA2 126 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZNF669Q96BR6 464 aaPredicted RBP14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 COPS8Q99627 209 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 GSDMCQ9BYG8 508 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 SEMA6CQ9H3T2 930 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 RDH14Q9HBH5 336 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 FOXJ2Q9P0K8 574 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 TMEM98Q9Y2Y6 226 aa14.76□□□□□ -0.05
CDC42SE1-205ENST00000491825 PRAMEF33A0A0G2JMD5 474 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 OR51F1A6NGY5 319 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 C9orf172C9J069 976 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 PRAMEF10O60809 474 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 MTX2O75431 263 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 VAPBO95292 243 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 ASMTLO95671 621 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 CPNE6O95741 557 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 RALBP11234 206 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZNF8P17098 575 aaPredicted RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 GNPDA1P46926 289 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 PLTPP55058 493 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 OR1D5P58170 312 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 CTBSQ01459 385 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 TMEM115Q12893 351 aaPredicted RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 FRG1Q14331 258 aaKnown RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 CRYMQ14894 314 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 TRADDQ15628 312 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 DBN1Q16643 649 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 BBS9Q3SYG4 887 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 FASTKD1Q53R41 847 aaKnown RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 SPANXN3Q5MJ09 141 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 LYPLAL1Q5VWZ2 237 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 STEAP4Q687X5 459 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZNF574Q6ZN55 896 aaPredicted RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 SERPINA9Q86WD7 417 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 DTX1Q86Y01 620 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 GALNT13Q8IUC8 556 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 LMNTD2Q8IXW0 634 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 LRRN4CLQ8ND94 238 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 GPR150Q8NGU9 434 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 OR6P1Q8NGX9 317 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 GDAP1Q8TB36 358 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 MED8Q96G25 268 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZNF514Q96K75 400 aaPredicted RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 PWWP2AQ96N64 755 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 OR2M4Q96R27 311 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 CMKLR1Q99788 373 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 NUDT22Q9BRQ3 303 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 TRIM56Q9BRZ2 755 aaKnown RBP14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 OR2AG1Q9H205 316 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 CATSPERZQ9NTU4 200 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZDHHC3Q9NYG2 299 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 FAM169AQ9Y6X4 670 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 COL6A6A6NMZ7 2263 aa14.75□□□□□ -0.05
CDC42SE1-205ENST00000491825 CFAP99D6REC4 459 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 GRID2O43424 1007 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 BANF1O75531 89 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CDK14O94921 469 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 MSH3P20585 1137 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CD1CP29017 333 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 AKT1P31749 480 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 ELK3P41970 407 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TTPAP49638 278 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CDKN1CP49918 316 aaPredicted RBP14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TUBB4BP68371 445 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 PDIA2Q13087 525 aaKnown RBP14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CUL1Q13616 776 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 GTF2H3Q13889 308 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CLPPQ16740 277 aaPredicted RBP14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 LONRF1Q17RB8 773 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TYSND1Q2T9J0 566 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 MAP9Q49MG5 647 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 BCL7AQ4VC05 210 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 SLC30A9Q6PML9 568 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CES3Q6UWW8 571 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 LRRTM4Q86VH4 590 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZNF547Q8IVP9 402 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 IGDCC3Q8IVU1 814 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 RASGEF1AQ8N9B8 481 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TTC1Q99614 292 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TIMM29Q9BSF4 260 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 B3GNT4Q9C0J1 378 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 FAM96AQ9H5X1 160 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 PLAC1Q9HBJ0 212 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 ARFGAP3Q9NP61 516 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 ZC3H7BQ9UGR2 993 aaKnown RBP14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 CHMP2BQ9UQN3 213 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 PLEKHM1Q9Y4G2 1056 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 PCYT1BQ9Y5K3 369 aaPredicted RBP14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 TENM4Q6N022 2769 aa14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 SETXQ7Z333 2677 aaKnown RBP14.74□□□□□ -0.05
CDC42SE1-205ENST00000491825 FLNBO75369 2602 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms