RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PRSS42Q7Z5A4 293 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 NAT14Q8WUY8 206 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 NKD1Q969G9 470 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 KIAA1143Q96AT1 154 aaPredicted RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 RAB33BQ9H082 229 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 TRIT1Q9H3H1 467 aaKnown RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 SMARCAL1Q9NZC9 954 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 CFAP20Q9Y6A4 193 aaKnown RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 IGLV3-16A0A075B6K0 115 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 MROH6A6NGR9 719 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 AP2A2O94973 939 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 NSG1P42857 185 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 ARL4DP49703 201 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 C19orf57Q0VDD7 668 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 CCDC38Q502W7 563 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 LYPLAL1Q5VWZ2 237 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 KIAA1614Q5VZ46 1190 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 DRICH1Q6PGQ1 229 aaPredicted RBP17.05■□□□□ 0.32
SEC13-218ENST00000490283 OOSP2Q86WS3 158 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 NLGN4XQ8N0W4 816 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 NLGN4YQ8NFZ3 816 aaPredicted RBP17.05■□□□□ 0.32
SEC13-218ENST00000490283 UBXN4Q92575 508 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 INSM2Q96T92 566 aaPredicted RBP17.05■□□□□ 0.32
SEC13-218ENST00000490283 PPP2R2CQ9Y2T4 447 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 PCDHGA4Q9Y5G9 962 aa17.05■□□□□ 0.32
SEC13-218ENST00000490283 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 AP3B1O00203 1094 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 SGTAO43765 313 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 CEP104O60308 925 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 STK17BO94768 372 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 FTH1P02794 183 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 ADRA1DP25100 572 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 MAP4P27816 1152 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 PPARGP37231 505 aaPredicted RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 CDKN1CP49918 316 aaPredicted RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 ARSDP51689 593 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 BASP1P80723 227 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 PRKAA1Q13131 559 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 SRSF6Q13247 344 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 ITIH4Q14624 930 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 IL11RAQ14626 422 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 DBN1Q16643 649 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 DNTTIP2Q5QJE6 756 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 AFTPHQ6ULP2 937 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 PPHLN1Q8NEY8 458 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 RMDN2Q96LZ7 410 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 RANBP9Q96S59 729 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 CD180Q99467 661 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 ARHGAP9Q9BRR9 750 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 EFHD1Q9BUP0 239 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 TLR10Q9BXR5 811 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 KIR3DX1Q9H7L2 352 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 COG4Q9H9E3 785 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 APMAPQ9HDC9 416 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 SIDT1Q9NXL6 827 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 RIMKLBQ9ULI2 386 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 DRG1Q9Y295 367 aaKnown RBP17.04■□□□□ 0.32
SEC13-218ENST00000490283 NBEAQ8NFP9 2946 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 IGSF10Q6WRI0 2623 aa17.04■□□□□ 0.32
SEC13-218ENST00000490283 UBA6A0AVT1 1052 aaPredicted RBP17.03■□□□□ 0.32
SEC13-218ENST00000490283 KIF1CO43896 1103 aaKnown RBP17.03■□□□□ 0.32
SEC13-218ENST00000490283 ETS1P14921 441 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 PRAMEP78395 509 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 RPA4Q13156 261 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 TSTD2Q5T7W7 516 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 DUS1LQ6P1R4 473 aaKnown RBP17.03■□□□□ 0.32
SEC13-218ENST00000490283 CERS6Q6ZMG9 384 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 RASGRP3Q8IV61 690 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 PIANPQ8IYJ0 282 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 SIDT2Q8NBJ9 832 aaKnown RBP17.03■□□□□ 0.32
SEC13-218ENST00000490283 SPDYE1Q8NFV5 336 aaPredicted RBP17.03■□□□□ 0.32
SEC13-218ENST00000490283 KLHL6Q8WZ60 621 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 TTC9Q92623 222 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 OR6C1Q96RD1 312 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 FERD3LQ96RJ6 166 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 ULBP3Q9BZM4 244 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 PDE7BQ9NP56 450 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 CASS4Q9NQ75 786 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 EIF2B3Q9NR50 452 aaKnown RBP17.03■□□□□ 0.32
SEC13-218ENST00000490283 HRASLS2Q9NWW9 162 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 SLC24A2Q9UI40 661 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 ANAPC5Q9UJX4 755 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 PILRAQ9UKJ1 303 aa17.03■□□□□ 0.32
SEC13-218ENST00000490283 CCDC162PA2VCL2 907 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 OR6C74A6NCV1 312 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 OR5K3A6NET4 321 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 TLCD2A6NGC4 264 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 ITGB2P05107 769 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 OR56A5P0C7T3 313 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 PRSS56P0CW18 603 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 NELFEP18615 380 aaKnown RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 PSMA3P25788 255 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 CXCR5P32302 372 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 RPL22P35268 128 aaKnown RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 CD151P48509 253 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 COL9A2Q14055 689 aaPredicted RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 SIX1Q15475 284 aaPredicted RBP17.02■□□□□ 0.32
SEC13-218ENST00000490283 SYTL3Q4VX76 610 aa17.02■□□□□ 0.32
SEC13-218ENST00000490283 AARS2Q5JTZ9 985 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms