RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 APBA3O96018 575 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 LTFP02788 710 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP3A4P08684 503 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ADORA3P0DMS8 318 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC2A3P11169 496 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CD36P16671 472 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 POU3F3P20264 500 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 BTF3P20290 206 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CHRM3P20309 590 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 DDCP20711 480 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AGXTP21549 392 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KELP23276 732 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PSMA2P25787 234 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CD6P30203 668 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 OXTRP30559 389 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RFX2P48378 723 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MAPKAPK2P49137 400 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 HOXA1P49639 335 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CLK1P49759 484 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NAGLUP54802 743 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NRLP54845 237 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AP1S2P56377 157 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 EVA1CP58658 441 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CXCR4P61073 352 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP4F2P78329 520 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 UBE3AQ05086 875 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FPGSQ05932 587 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FOXM1Q08050 763 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP4F3Q08477 520 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 DBPQ10586 325 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CDK5R2Q13319 367 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PRPSAP1Q14558 356 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ANGPT1Q15389 498 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TAB1Q15750 504 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 BTBD16Q32M84 506 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM214AQ32MH5 1076 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 OTUD3Q5T2D3 398 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ARMC4Q5T2S8 1044 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 GPATCH4Q5T3I0 446 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ATF7IP2Q5U623 682 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RAP1GAP2Q684P5 730 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TYW3Q6IPR3 259 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CES5AQ6NT32 575 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 LAYNQ6UX15 382 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SCARA5Q6ZMJ2 495 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 HFE2Q6ZVN8 426 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF534Q76KX8 674 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 OTOP1Q7RTM1 612 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TLK2Q86UE8 772 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CCDC190Q86UF4 302 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 GPAT4Q86UL3 456 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 STK32CQ86UX6 486 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM35AQ86V20 835 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ADGRG3Q86Y34 549 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CBWD2Q8IUF1 395 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RASGRP3Q8IV61 690 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RIMKLAQ8IXN7 391 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 DAW1Q8N136 415 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 C7orf57Q8NEG2 295 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 STK35Q8TDR2 534 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AKAP1Q92667 903 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NXPE3Q969Y0 559 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM149B1Q96BN6 582 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MSANTD3Q96H12 275 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM84AQ96KN4 292 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NEDD4LQ96PU5 975 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 OR2A14Q96R47 310 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SDHCQ99643 169 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 IER2Q9BTL4 223 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CDADC1Q9BWV3 514 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM83DQ9H4H8 585 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MRM3Q9HC36 420 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MCCC2Q9HCC0 563 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TRMT13Q9NUP7 481 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SCN3BQ9NY72 215 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 EMC3Q9P0I2 261 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ERVK-18Q9QC07 812 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NARFQ9UHQ1 456 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ENOPH1Q9UHY7 261 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MAPRE3Q9UPY8 281 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MAN2B2Q9Y2E5 1009 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 DAGLAQ9Y4D2 1042 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CACNG2Q9Y698 323 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FER1L6Q2WGJ9 1857 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MEGF6O75095 1541 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KCPQ6ZWJ8 1503 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ARFGEF1Q9Y6D6 1849 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 A0A096LPK6 155 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CLRN2A0PK11 232 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 WDR27A2RRH5 827 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CCDC182A6NF36 153 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TTLL8A6PVC2 850 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM86B1E9PN63 330 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 J3QW42 95 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 UPK1AO00322 258 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 EEF2KO00418 725 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NFIBO00712 420 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MEIS2O14770 477 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TFECO14948 347 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms