RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 KIAA1143Q96AT1 154 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 MED8Q96G25 268 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 COX14Q96I36 57 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 CCDC74BQ96LY2 380 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 NSMCE3Q96MG7 304 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 ZPBPQ9BS86 351 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 SLC25A51Q9H1U9 297 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 CARD9Q9H257 536 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 RDH14Q9HBH5 336 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 MAGEE1Q9HCI5 957 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 TRIM39Q9HCM9 518 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 SLC39A1Q9NY26 324 aa8.73□□□□□ -1.01
TNRC6B-208ENST00000489500 PRAMEF33A0A0G2JMD5 474 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 IGHV5-10-1A0A0J9YXX1 117 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 A0A1W2PNU3 283 aaPredicted RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 KCNK1O00180 336 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 KMOO15229 486 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 GRID2O43424 1007 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 VEGFDO43915 354 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 SNX2O60749 519 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 PRAMEF10O60809 474 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 KCNJ13O60928 360 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 ZNF189O75820 626 aaPredicted RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 TNNT1P13805 278 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 ITIH1P19827 911 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 CD1CP29017 333 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 CLCNKAP51800 687 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 DCDC1P59894 354 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 DYNLT1P63172 113 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 SPA17Q15506 151 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 INSCQ1MX18 579 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 HENMT1Q5T8I9 393 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 CCDC181Q5TID7 509 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 SLC9A4Q6AI14 798 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 WDR74Q6RFH5 385 aaPredicted RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 CEACAM20Q6UY09 585 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 TSPYL5Q86VY4 417 aaPredicted RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 FAM129CQ86XR2 697 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 PLXDC1Q8IUK5 500 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 SFRP1Q8N474 314 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 TRAM1L1Q8N609 369 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 PQLC3Q8N755 202 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 BRSK1Q8TDC3 778 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 TFB1MQ8WVM0 346 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 RAPGEF5Q92565 580 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 P3H4Q92791 437 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 IMP4Q96G21 291 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 RBM41Q96IZ5 413 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 AGAP3Q96P47 875 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 VAT1Q99536 393 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 NUDT22Q9BRQ3 303 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 DDA1Q9BW61 102 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 PACSIN1Q9BY11 444 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 TRIT1Q9H3H1 467 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 OSGEPL1Q9H4B0 414 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 TRABDQ9H4I3 376 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 SARS2Q9NP81 518 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 GPATCH2Q9NW75 528 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 HACD3Q9P035 362 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 DUSP13Q9UII6 198 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 PCDHGA3Q9Y5H0 932 aa8.72□□□□□ -1.01
TNRC6B-208ENST00000489500 COL6A6A6NMZ7 2263 aa8.71□□□□□ -1.01
TNRC6B-208ENST00000489500 BAHCC1Q9P281 2608 aa8.71□□□□□ -1.01
TNRC6B-208ENST00000489500 TRBV23OR9-2A0A075B6M9 112 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 IGHV1OR21-1A0A087WYE8 117 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 B4E171 279 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 B8ZZF3 427 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 AGRPO00253 132 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 PPM1DO15297 605 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 PSTPIP1O43586 416 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 NUAK1O60285 661 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 DNAJC6O75061 913 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 MFAP3LO75121 409 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 STK10O94804 968 aaKnown RBP8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 NDST3O95803 873 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 PRLP01236 227 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 VIPP01282 170 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 FUCA1P04066 466 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 PRB1P04280 392 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 ATP1A1P05023 1023 aaKnown RBP8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 ACP5P13686 325 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 F3P13726 295 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 AMD1P17707 334 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 IDSP22304 550 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 CYLC1P35663 651 aaPredicted RBP8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 TSPAN7P41732 249 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 HALP42357 657 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 MAGEA1P43355 309 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 EGR3Q06889 387 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 NIPAL4Q0D2K0 466 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 SLC10A2Q12908 348 aaPredicted RBP8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 NFATC2Q13469 925 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 GALNT3Q14435 633 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 C16orf72Q14CZ0 275 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 ASTE1Q2TB18 679 aaPredicted RBP8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 TEX44Q53QW1 395 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.02
TNRC6B-208ENST00000489500 KCTD16Q68DU8 428 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms