RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MED13Q9UHV7 2174 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 GLYATL1P3A0A0U1RQE8 302 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 A6NL46 340 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 GAPDHSO14556 408 aaPredicted RBP18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 CAPN1P07384 714 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 CD68P34810 354 aaPredicted RBP18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 CHRNA4P43681 627 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 VAV2P52735 878 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 WNT3AP56704 352 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 MESDQ14696 234 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 IQCB1Q15051 598 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 SIRPB2Q5JXA9 342 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 FNBP1LQ5T0N5 605 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 KDELC1Q6UW63 502 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 FAM198BQ6UWH4 519 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 MAMDC2Q7Z304 686 aaPredicted RBP18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 ZBTB2Q8N680 514 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 GLIS1Q8NBF1 620 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 ZFPM2Q8WW38 1151 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 KIR3DX1Q9H7L2 352 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 GPR83Q9NYM4 423 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 FAM153AQ9UHL3 310 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 ESPL1Q14674 2120 aa18.94■□□□□ 0.62
SMPDL3A-202ENST00000487215 RP1L1Q8IWN7 2480 aaPredicted RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 ENO4A6NNW6 628 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 BUD23O43709 281 aaKnown RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 KRT86O43790 486 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 LCA5LO95447 670 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 CLDN1O95832 211 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 ZFXP17010 805 aaPredicted RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 VARSP26640 1264 aaKnown RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 DYNLT1P63172 113 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 ITGA9Q13797 1035 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 LONRF2Q1L5Z9 754 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 ZNF789Q5FWF6 425 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 DET1Q7L5Y6 550 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 GLT6D1Q7Z4J2 308 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 RFX6Q8HWS3 928 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 SLC25A41Q8N5S1 370 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 TMEM102Q8N9M5 508 aaPredicted RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 CLIP3Q96DZ5 547 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 C19orf60Q96EN9 201 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 TCTN2Q96GX1 697 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 SMAD5Q99717 465 aaKnown RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 FANCEQ9HB96 536 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 PCMTD2Q9NV79 361 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 SMOXQ9NWM0 555 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 ERRFI1Q9UJM3 462 aaPredicted RBP18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 POMT2Q9UKY4 750 aa18.93■□□□□ 0.62
SMPDL3A-202ENST00000487215 PCSK5Q92824 1860 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 MGAT4DA6NG13 374 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 WIPF3A6NGB9 483 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 SLC9B1P1A6NJY1 282 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 KRT1P04264 644 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 GYPCP04921 128 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 POLR2CP19387 275 aaPredicted RBP18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 NFKB1P19838 968 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 HLA-DPA1P20036 260 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 MSH3P20585 1137 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 AKT1P31749 480 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 DCTP40126 519 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 FANCCQ00597 558 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 ATP1A4Q13733 1029 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 PRKD1Q15139 912 aaPredicted RBP18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 MED25Q71SY5 747 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 SYTL1Q8IYJ3 562 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 OR1L3Q8NH93 324 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 BLOC1S5Q8TDH9 187 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 NAT14Q8WUY8 206 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 IQCDQ96DY2 449 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 RMDN2Q96LZ7 410 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 HACD3Q9P035 362 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 FAM8A1Q9UBU6 413 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 ACSL5Q9ULC5 683 aa18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 LUC7L2Q9Y383 392 aaKnown RBP18.92■□□□□ 0.62
SMPDL3A-202ENST00000487215 LDLRP01130 860 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 EPOP01588 193 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 SLC35G4P0C7Q5 338 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 CDH3P22223 829 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 RRADP55042 308 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 WASHC5Q12768 1159 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 RAPSNQ13702 412 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 NCF4Q15080 339 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 NR6A1Q15406 480 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 PTCHD3Q3KNS1 767 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 CAVIN1Q6NZI2 390 aaKnown RBP18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 OR4E2Q8NGC2 313 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 OR2L2Q8NH16 312 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 RNF25Q96BH1 459 aaPredicted RBP18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 SNRNP40Q96DI7 357 aaKnown RBP18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 MRGPRX2Q96LB1 330 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 ACTR5Q9H9F9 607 aaPredicted RBP18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 C1GALT1Q9NS00 363 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 PKP3Q9Y446 797 aa18.91■□□□□ 0.62
SMPDL3A-202ENST00000487215 TMEM150CB9EJG8 249 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 F5H423 210 aaPredicted RBP18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 TMEM253P0C7T8 217 aa18.9■□□□□ 0.62
SMPDL3A-202ENST00000487215 PRKAA1Q13131 559 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms