RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PRSS21Q9Y6M0 314 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTCD1-205ENST00000485746 SDR42E2A6NKP2 422 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 CDRT15L2A8MXV6 281 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 CD3EAPO15446 510 aaKnown RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 CAPN5O15484 640 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 AVILO75366 819 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 ITGB6P18564 788 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 ITPKBP27987 946 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 ETV5P41161 510 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 TTPAP49638 278 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 SEPHS1P49903 392 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 ACVR1Q04771 509 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 CACHD1Q5VU97 1274 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 ANKRD22Q5VYY1 191 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 PTRHD1Q6GMV3 140 aaKnown RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 DUS1LQ6P1R4 473 aaKnown RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 PACS1Q6VY07 963 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 SPACA3Q8IXA5 215 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 GPR150Q8NGU9 434 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 CPT1BQ92523 772 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 RUNDC3BQ96NL0 473 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 DPH1Q9BZG8 443 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 DDX47Q9H0S4 455 aaKnown RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 MRM3Q9HC36 420 aaKnown RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 XAB2Q9HCS7 855 aaKnown RBP12.23□□□□□ -0.45
PTCD1-205ENST00000485746 PCDHB11Q9Y5F2 797 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 PCDHGA7Q9Y5G6 932 aa12.23□□□□□ -0.45
PTCD1-205ENST00000485746 UBA6A0AVT1 1052 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 LIN7AO14910 233 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 NVLO15381 856 aaKnown RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 OR1I1O60431 355 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PRAMEF10O60809 474 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 VAPBO95292 243 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 FGF3P11487 239 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 CASQ1P31415 396 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PREPP48147 710 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 ARL4DP49703 201 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 CSE1LP55060 971 aaKnown RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 GFERP55789 205 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PLOD1Q02809 727 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PRKAA1Q13131 559 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 RPA4Q13156 261 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 THOC5Q13769 683 aaKnown RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 BOP1Q14137 746 aaKnown RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PAPD7Q5XG87 772 aaKnown RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 CAPRIN2Q6IMN6 1127 aaKnown RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 MRNIPQ6NTE8 343 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 FAM92BQ6ZTR7 304 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PCGF5Q86SE9 256 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 CLEC14AQ86T13 490 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 LDB1Q86U70 411 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-205ENST00000485746 OOSP2Q86WS3 158 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PPIL6Q8IXY8 311 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 MCUQ8NE86 351 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 GSDMBQ8TAX9 411 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 ZFPM2Q8WW38 1151 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 ART4Q93070 314 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 MFSD3Q96ES6 412 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 SGSM3Q96HU1 749 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 C9orf72Q96LT7 481 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 RMDN2Q96LZ7 410 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 KIFC1Q9BW19 673 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 HRASLS2Q9NWW9 162 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 OCIAD1Q9NX40 245 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 OGFRQ9NZT2 677 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 PDP2Q9P2J9 529 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 SOX13Q9UN79 622 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
PTCD1-205ENST00000485746 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 OR6C74A6NCV1 312 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 PRMT5O14744 637 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-205ENST00000485746 MLNP12872 115 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 PDHA2P29803 388 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 MAGEA6P43360 314 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 CAPZBP47756 277 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 LEPRP48357 1165 aaKnown RBP12.21□□□□□ -0.45
PTCD1-205ENST00000485746 CD151P48509 253 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 RAB15P59190 212 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 FOXM1Q08050 763 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.45
PTCD1-205ENST00000485746 TMED2Q15363 201 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 DCAF12Q5T6F0 453 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 NAPRTQ6XQN6 538 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 ZNF534Q76KX8 674 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 ZFAND4Q86XD8 727 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 PHC3Q8NDX5 983 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 OR4E2Q8NGC2 313 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 LCN9Q8WX39 176 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 RSC1A1Q92681 617 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 TFGQ92734 400 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-205ENST00000485746 ASPSCR1Q9BZE9 553 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 OR52A5Q9H2C5 316 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 SRMSQ9H3Y6 488 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 KIR3DX1Q9H7L2 352 aa12.21□□□□□ -0.45
PTCD1-205ENST00000485746 MVB12BQ9H7P6 319 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms