RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 OR2L2Q8NH16 312 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 RBM41Q96IZ5 413 aaKnown RBP18.77■□□□□ 0.6
COL27A1-205ENST00000485397 TRIM55Q9BYV6 548 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 GBA3Q9H227 469 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 SLC24A2Q9UI40 661 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 SGTAO43765 313 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 SRP72O76094 671 aaKnown RBP18.76■□□□□ 0.59
COL27A1-205ENST00000485397 KPNA2P52292 529 aaKnown RBP18.76■□□□□ 0.59
COL27A1-205ENST00000485397 MLLT10P55197 1068 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 HSD11B2P80365 405 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 SEMA5AQ13591 1074 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 TAF1AQ15573 450 aaPredicted RBP18.76■□□□□ 0.59
COL27A1-205ENST00000485397 GPR19Q15760 415 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 RANBP10Q6VN20 620 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 DAAM2Q86T65 1068 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 MIB2Q96AX9 1013 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 RMDN2Q96LZ7 410 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 ACSL5Q9ULC5 683 aa18.76■□□□□ 0.59
COL27A1-205ENST00000485397 CLEC18AA5D8T8 446 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 C2orf81A6NN90 581 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 APOC4-APOC2K7ER74 178 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 DDX3YO15523 660 aaKnown RBP18.75■□□□□ 0.59
COL27A1-205ENST00000485397 ANXA9O76027 345 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 APOC2P02655 101 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 PTMSP20962 102 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 PTPN4P29074 926 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 ADRA1AP35348 466 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 TUBB4BP68371 445 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 XIAPP98170 497 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 TUBB2AQ13885 445 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 BCL7AQ4VC05 210 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 ITPRIPL1Q6GPH6 555 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 ARMC6Q6NXE6 501 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 CLEC18BQ6UXF7 455 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 APLFQ8IW19 511 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-205ENST00000485397 CFAP206Q8IYR0 622 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 CLEC18CQ8NCF0 446 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 OR13C4Q8NGS5 318 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 ZFPM2Q8WW38 1151 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 MR1Q95460 341 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 ZNF501Q96CX3 271 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-205ENST00000485397 TUBB2BQ9BVA1 445 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 GPR87Q9BY21 358 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 FAM96AQ9H5X1 160 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 KIR3DX1Q9H7L2 352 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 KCND1Q9NSA2 647 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 PCDHA13Q9Y5I0 950 aa18.75■□□□□ 0.59
COL27A1-205ENST00000485397 CPNE3O75131 537 aaKnown RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 SCRG1O75711 98 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 ZBTB11O95625 1053 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 SLC35G4P0C7Q5 338 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 POLR2CP19387 275 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 PSMB4P28070 264 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 TMPRSS15P98073 1019 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 OTUD4Q01804 1114 aaKnown RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 CHAF1BQ13112 559 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 GPS2Q13227 327 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 MSLNQ13421 630 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 LAMB3Q13751 1172 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 GSE1Q14687 1217 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 ANKRD20A2Q5SQ80 823 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 ANKRD20A1Q5TYW2 823 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 PRAMEF17Q5VTA0 474 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 ANKRD20A3Q5VUR7 823 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 CPZQ66K79 652 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 CAPRIN2Q6IMN6 1127 aaKnown RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 C11orf63Q6NUN7 778 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 MICALCLQ6ZW33 695 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 TMEM126BQ8IUX1 230 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 TC2NQ8N9U0 490 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 SLC38A9Q8NBW4 561 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 OR4E2Q8NGC2 313 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 ACTL9Q8TC94 416 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 LINC00615Q96LM1 132 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 FAM118BQ9BPY3 351 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 CRLS1Q9UJA2 301 aa18.74■□□□□ 0.59
COL27A1-205ENST00000485397 FARSAQ9Y285 508 aaKnown RBP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
COL27A1-205ENST00000485397 MACROD2A1Z1Q3 448 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 C5orf60A6NFR6 353 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 LCA5LO95447 670 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 RPS15P62841 145 aaKnown RBP18.73■□□□□ 0.59
COL27A1-205ENST00000485397 PDE1BQ01064 536 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 IL10RAQ13651 578 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 KRT33BQ14525 404 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 UGT8Q16880 541 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 TMTC4Q5T4D3 741 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 SYVN1Q86TM6 617 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 DCUN1D1Q96GG9 259 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 NRTNQ99748 197 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 TLR10Q9BXR5 811 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 SOHLH2Q9NX45 425 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 COLEC10Q9Y6Z7 277 aa18.73■□□□□ 0.59
COL27A1-205ENST00000485397 KLHL33A6NCF5 533 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 SLC9B1P1A6NJY1 282 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 AGAP14A8MT82 685 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 CCL22O00626 93 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 CD97P48960 835 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms