RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 LIN7AO14910 233 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 RAD51CO43502 376 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 APOA4P06727 396 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 MTHFD1P11586 935 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 BRAFP15056 766 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 OGNP20774 298 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NDUFS1P28331 727 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 MAGEA3P43357 314 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 PDX1P52945 283 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 UBE2IP63279 158 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 MRPS25P82663 173 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 PLOD1Q02809 727 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 RPA4Q13156 261 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SEMA3AQ14563 771 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NR1D2Q14995 579 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CLCA4Q14CN2 919 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 BRD3Q15059 726 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 RPE65Q16518 533 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 C3orf38Q5JPI3 329 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NKAIN2Q5VXU1 208 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ZNF470Q6ECI4 717 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 HIBCHQ6NVY1 386 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NEPROQ6NW34 567 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 TMEM26Q6ZUK4 368 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CENPUQ71F23 418 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 LMNTD2Q8IXW0 634 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 MDM1Q8TC05 714 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NCSTNQ92542 709 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CFAP36Q96G28 342 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ATXN7L3BQ96GX2 97 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 TCF12Q99081 682 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ERP44Q9BS26 406 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NRSN2Q9GZP1 204 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CCDC86Q9H6F5 360 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 UCK1Q9HA47 277 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ZNF624Q9P2J8 865 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ENTPD2Q9Y5L3 495 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 PRSS21Q9Y6M0 314 aa11.48□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CCDC187A0A096LP49 1063 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CTAGE15A4D2H0 777 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 H3BMM5 538 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 AGRPO00253 132 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 KPNA5O15131 536 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 B4GAT1O43505 415 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SGTAO43765 313 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 KDM1AO60341 852 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 UBXN7O94888 489 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CAPNS1P04632 268 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 JMJD7P0C870 316 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CTAGE8P0CG41 777 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 IVDP26440 423 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 RBMS1P29558 406 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 FMO4P31512 558 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SLC19A1P41440 591 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 RPL21P46778 160 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 PREPP48147 710 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CSE1LP55060 971 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 GABREP78334 506 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 PDIA2Q13087 525 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 EIF3IQ13347 325 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 GPR18Q14330 331 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CRYMQ14894 314 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ST3GAL2Q16842 350 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SNAP47Q5SQN1 464 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 HP1BP3Q5SSJ5 553 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ARMC6Q6NXE6 501 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 OTOAQ7RTW8 1153 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CTAGE6Q86UF2 777 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 KCNMB4Q86W47 210 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CTAGE4Q8IX94 777 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 LSMEM2Q8N112 164 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 GPR150Q8NGU9 434 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 WDR36Q8NI36 951 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SKA2Q8WVK7 121 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ASZ1Q8WWH4 475 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 LRRC39Q96DD0 335 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SIGLEC10Q96LC7 697 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 FCRL3Q96P31 734 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 FERD3LQ96RJ6 166 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 CMKLR1Q99788 373 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 EBNA1BP2Q99848 306 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 NUDT22Q9BRQ3 303 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 TBC1D10AQ9BXI6 508 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 INTS10Q9NVR2 710 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 IL1RAPL1Q9NZN1 696 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 WHRNQ9P202 907 aa11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 ZC3H7BQ9UGR2 993 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP2-217ENST00000484546 SATB2Q9UPW6 733 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms