RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 KLHL41O60662 606 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 LILRB5O75023 590 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ESRRBO95718 433 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 S100BP04271 92 aaPredicted RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 VCLP18206 1134 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 GPR1P46091 355 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 CDC16Q13042 620 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 KLF10Q13118 480 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 NAA25Q14CX7 972 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 BCL7AQ4VC05 210 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ZNF776Q68DI1 518 aaPredicted RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ADGRG6Q86SQ4 1221 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 VRK3Q8IV63 474 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 KIF2BQ8N4N8 673 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ASZ1Q8WWH4 475 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 UTP4Q969X6 686 aaKnown RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 ESAMQ96AP7 390 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ZNF382Q96SR6 550 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 CCM2Q9BSQ5 444 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 KCNK12Q9HB15 430 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 TRIM39Q9HCM9 518 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 CD248Q9HCU0 757 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 SEMA4BQ9NPR2 832 aaPredicted RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 TAS2R1Q9NYW7 299 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 DNAJC15Q9Y5T4 150 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 REV3LO60673 3130 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 A0A1B0GTL3 188 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 K7ESM1 405 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 INPP4BO15327 924 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ADAM23O75077 832 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 EGFP01133 1207 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ENO1P06733 434 aaKnown RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 NCF2P19878 526 aaPredicted RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 DRD1P21728 446 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 GGT5P36269 586 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 PKNOX1P55347 436 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 SEC13P55735 322 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 HSPA14Q0VDF9 509 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 SP140Q13342 867 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 KIAA1211LQ6NV74 962 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 TMEM220Q6QAJ8 160 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 RINLQ6ZS11 566 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 LARP4Q71RC2 724 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLK3-204ENST00000483723 SYVN1Q86TM6 617 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 C10orf67Q8IYJ2 551 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 HDDC3Q8N4P3 179 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 IL17RCQ8NAC3 791 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 ELMO1Q92556 727 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 COX14Q96I36 57 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 NUSAP1Q9BXS6 441 aaKnown RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 CD244Q9BZW8 370 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 PARVBQ9HBI1 364 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 EIF2B4Q9UI10 523 aaKnown RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 PDE10AQ9Y233 779 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 A0A1W2PQF6 199 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 OR2AG2A6NM03 316 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 H0YHG0 523 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 SOX1O00570 391 aaPredicted RBP13.77□□□□□ -0.21
CLK3-204ENST00000483723 DCXO43602 365 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 ATG13O75143 517 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 MATN4O95460 622 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 KRT16P08779 473 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 GLULP15104 373 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 TEAD1P28347 426 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 RPIAP49247 311 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 FOXA1P55317 472 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 MRPS21P82921 87 aaKnown RBP13.77□□□□□ -0.21
CLK3-204ENST00000483723 PON2Q15165 354 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 C18orf21Q32NC0 220 aaPredicted RBP13.77□□□□□ -0.21
CLK3-204ENST00000483723 SDE2Q6IQ49 451 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 ADAMTSL4Q6UY14 1074 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 CHCHD4Q8N4Q1 142 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.21
CLK3-204ENST00000483723 LINC00615Q96LM1 132 aaPredicted RBP13.77□□□□□ -0.21
CLK3-204ENST00000483723 PPP1R36Q96LQ0 422 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 MIPEPQ99797 713 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 C1orf21Q9H246 121 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 TUBB1Q9H4B7 451 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 TSR3Q9UJK0 312 aaKnown RBP13.77□□□□□ -0.21
CLK3-204ENST00000483723 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
CLK3-204ENST00000483723 B2RBV5 119 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 OR7A17O14581 309 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GSC2O15499 205 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 VEGFDO43915 354 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 SKAP2O75563 359 aaPredicted RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 TM7SF2O76062 418 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 ANXA5P08758 320 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GSTM1P09488 218 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 UROSP10746 265 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 PRDX3P30048 256 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms