RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 BOP1Q14137 746 aaKnown RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 GPR18Q14330 331 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 MORF4L2Q15014 288 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 BRD3Q15059 726 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 ARMC3Q5W041 872 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 NAPRTQ6XQN6 538 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 KDF1Q8NAX2 398 aaPredicted RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 LKAAEAR1Q8TD35 194 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 NCSTNQ92542 709 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 STAMBPL1Q96FJ0 436 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 LIN37Q96GY3 246 aaPredicted RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 SNF8Q96H20 258 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 SIGLEC10Q96LC7 697 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 CCDC74BQ96LY2 380 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 POLR1BQ9H9Y6 1135 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 UCK1Q9HA47 277 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 SLC40A1Q9NP59 571 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 MAGEB16A2A368 324 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 IQCF5A8MTL0 148 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 EFCAB8A8MWE9 144 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 PRMT5O14744 637 aaPredicted RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 RAD51CO43502 376 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 URI1O94763 535 aaPredicted RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 USP1O94782 785 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 UBXN7O94888 489 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 SEC31AO94979 1220 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 F7P08709 466 aaPredicted RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 GSTM1P09488 218 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 HGFP14210 728 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 PDHA2P29803 388 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 RPL21P46778 160 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 LSSP48449 732 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 ITGA8P53708 1063 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 CSE1LP55060 971 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 GSTM4Q03013 218 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 SQSTM1Q13501 440 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 CLPPQ16740 277 aaPredicted RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 BBS9Q3SYG4 887 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 SYTL3Q4VX76 610 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 CAPRIN2Q6IMN6 1127 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 MRNIPQ6NTE8 343 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 RAB11FIP2Q7L804 512 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 TMEM135Q86UB9 458 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 RBM12BQ8IXT5 1001 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 FBXO39Q8N4B4 442 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 OR4D9Q8NGE8 314 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
SSR1-208ENST00000483409 PWWP2AQ96N64 755 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 OR52A5Q9H2C5 316 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 OGFRQ9NZT2 677 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 DKK4Q9UBT3 224 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 ZMIZ1Q9ULJ6 1067 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 DMXL2Q8TDJ6 3036 aa13.09□□□□□ -0.31
SSR1-208ENST00000483409 ADAMTS20P59510 1910 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 URB1O60287 2271 aaKnown RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 ZCWPW2A0A1B0GU75 182 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 A8MU76 341 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 F8W8V4 182 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 TAF4O00268 1085 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 IFRD1O00458 451 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 LIN7AO14910 233 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 PLD2O14939 933 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 THRAP10827 490 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 AMD1P17707 334 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 LIMK2P53671 638 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 GFERP55789 205 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 EIF3BP55884 814 aaKnown RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 RPA4Q13156 261 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 KRT33BQ14525 404 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 C16orf72Q14CZ0 275 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 TYSND1Q2T9J0 566 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 HP1BP3Q5SSJ5 553 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 ZNF470Q6ECI4 717 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 PTRHD1Q6GMV3 140 aaKnown RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 HIBCHQ6NVY1 386 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 NEPROQ6NW34 567 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 TMEM71Q6P5X7 295 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 ZNF449Q6P9G9 518 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 WDR74Q6RFH5 385 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 PROSER1Q86XN7 944 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 RSC1A1Q92681 617 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 PRR11Q96HE9 360 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 DPYSL5Q9BPU6 564 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 P2RY12Q9H244 342 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms