RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CASC4Q6P4E1 433 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 CFAP206Q8IYR0 622 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 Q8N9G6 341 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 WDR36Q8NI36 951 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 GABPB2Q8TAK5 448 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 CALML6Q8TD86 181 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 CXorf40BQ96DE9 158 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 CCDC97Q96F63 343 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 C16orf45Q96MC5 204 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 EBNA1BP2Q99848 306 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 ERP44Q9BS26 406 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 P2RY12Q9H244 342 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 OR52A5Q9H2C5 316 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 INTS10Q9NVR2 710 aaKnown RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 WHRNQ9P202 907 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 MARCH4Q9P2E8 410 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-217ENST00000479161 PCDHB1Q9Y5F3 818 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 RPS6KL1Q9Y6S9 549 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 COLEC10Q9Y6Z7 277 aa15.14■□□□□ 0.01
C9orf3-217ENST00000479161 TRBV23OR9-2A0A075B6M9 112 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 SLC5A10A0PJK1 596 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 GOLGA8MH3BSY2 632 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 PGAM1P18669 254 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 ERVPABLB-1P60509 514 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 SEMA3AQ14563 771 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 KLHL35Q6PF15 583 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 PLXDC1Q8IUK5 500 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 CILP2Q8IUL8 1156 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 AGGF1Q8N302 714 aaeCLIP15.13■□□□□ 0.011e-6■■■■■ 29.4
C9orf3-217ENST00000479161 ASZ1Q8WWH4 475 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 STAMBPL1Q96FJ0 436 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 AHCYL2Q96HN2 611 aaKnown RBP15.13■□□□□ 0.01
C9orf3-217ENST00000479161 FCRL3Q96P31 734 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-217ENST00000479161 PANX3Q96QZ0 392 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 PHACTR1Q9C0D0 580 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 CCDC86Q9H6F5 360 aaKnown RBP15.13■□□□□ 0.01
C9orf3-217ENST00000479161 EPB41L5Q9HCM4 733 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 LATS2Q9NRM7 1088 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 PRSS21Q9Y6M0 314 aa15.13■□□□□ 0.01
C9orf3-217ENST00000479161 OR52A4PA6NMU1 304 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 C1QTNF9BB2RNN3 333 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 E7ESA3 106 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 IFRD1O00458 451 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-217ENST00000479161 OR1I1O60431 355 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 GPC4O75487 556 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 NDUFS3O75489 264 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 C9P02748 559 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 ESR1P03372 595 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 C1QTNF9P0C862 333 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 CLDN6P56747 220 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 CFHR1Q03591 330 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 MAP9Q49MG5 647 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 SPANXN3Q5MJ09 141 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 DUPD1Q68J44 220 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 ZNF574Q6ZN55 896 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-217ENST00000479161 GALNT7Q86SF2 657 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 ATXN7L3BQ96GX2 97 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 ZNF578Q96N58 590 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-217ENST00000479161 INSM2Q96T92 566 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-217ENST00000479161 CMKLR1Q99788 373 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 WWP1Q9H0M0 922 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 RAB17Q9H0T7 212 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 KIR3DX1Q9H7L2 352 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 MVB12BQ9H7P6 319 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 KLHL42Q9P2K6 505 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 GNPTGQ9UJJ9 305 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 TEX264Q9Y6I9 313 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 CHD6Q8TD26 2715 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 MN1Q10571 1320 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-217ENST00000479161 AHCTF1Q8WYP5 2266 aa15.12■□□□□ 0.01
C9orf3-217ENST00000479161 IGHV5-10-1A0A0J9YXX1 117 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 UBXN7O94888 489 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 SLCO2B1O94956 709 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ANKRD34CP0C6C1 535 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 THRAP10827 490 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ACADLP28330 430 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 PBLDP30039 288 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 RPL21P46778 160 aaKnown RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ITGA8P53708 1063 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ARL4CP56559 192 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 CAV1Q03135 178 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 GPR18Q14330 331 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 SEPT7Q16181 437 aaKnown RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 HIF1AQ16665 826 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 CES3Q6UWW8 571 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 TMPRSS9Q7Z410 1059 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ARHGAP22Q7Z5H3 698 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 B3GNT8Q7Z7M8 397 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 PDZD3Q86UT5 571 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 CARFQ8N187 725 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 LPGAT1Q92604 370 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ZNF669Q96BR6 464 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 PRR11Q96HE9 360 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 C12orf66Q96MD2 445 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 SLC46A1Q96NT5 459 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 BIRC8Q96P09 236 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 NUDT22Q9BRQ3 303 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms