RNA–Protein interactions for RNA: ENST00000479042.1

LSP1P2-201, Transcript of LSP1 pseudogene 2, humanhuman

BASIC

Gene LSP1P2, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P2-201ENST00000479042 VASH2Q86V25 355 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 KRT222Q8N1A0 295 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 OTUD6BQ8N6M0 293 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 HM13Q8TCT9 377 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 ACTRT1Q8TDG2 376 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 CPT1BQ92523 772 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 SH3KBP1Q96B97 665 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 GRAMD1AQ96CP6 724 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 MFSD3Q96ES6 412 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 PPM1MQ96MI6 270 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 HGH1Q9BTY7 390 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 TSR3Q9UJK0 312 aaKnown RBP11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 NEU2Q9Y3R4 380 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 PIKFYVEQ9Y2I7 2098 aa11.23□□□□□ -0.61
LSP1P2-201ENST00000479042 TMX2-CTNND1H3BSU7 103 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 ZW10O43264 779 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 BANF1O75531 89 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 RASSF9O75901 435 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 TPSB2P20231 275 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 PSMA3P25788 255 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CSTF2P33240 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CAPZBP47756 277 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CXADRP78310 365 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 SH3BP2P78314 561 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 ACVR1Q04771 509 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 MN1Q10571 1320 aaPredicted RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 EIF3IQ13347 325 aaKnown RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 COL9A2Q14055 689 aaPredicted RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 TPSAB1Q15661 275 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 ZNF658BQ4V348 819 aaPredicted RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 FASTKD1Q53R41 847 aaKnown RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 SDK2Q58EX2 2172 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 FBXO38Q6PIJ6 1188 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 IGF2-ASQ6U949 168 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 WASH2PQ6VEQ5 465 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CERS6Q6ZMG9 384 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 PDZD3Q86UT5 571 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 KLHL7Q8IXQ5 586 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 PHC3Q8NDX5 983 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 OR4L1Q8NH43 312 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 ELMO1Q92556 727 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 ELMO2Q96JJ3 720 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 ZNF514Q96K75 400 aaPredicted RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 LINC00615Q96LM1 132 aaPredicted RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CCM2Q9BSQ5 444 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 WASH6PQ9NQA3 447 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 HOMER3Q9NSC5 361 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 TREX1Q9NSU2 369 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CATSPERZQ9NTU4 200 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 CIDEBQ9UHD4 219 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 B3GALT1Q9Y5Z6 326 aa11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
LSP1P2-201ENST00000479042 GOLGA6L10A0A0M3HER8 536 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 HGSO14964 777 aaPredicted RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 ARNTP27540 789 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 NSG1P42857 185 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 MRPS25P82663 173 aaKnown RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 PRKG2Q13237 762 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 KRT33BQ14525 404 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 KCNAB1Q14722 419 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 CASC4Q6P4E1 433 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 LRRC8BQ6P9F7 803 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 WDR74Q6RFH5 385 aaPredicted RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 CAND1Q86VP6 1230 aaKnown RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 LMNTD1Q8N9Z9 388 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 AGBL5Q8NDL9 886 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 FAM136AQ96C01 138 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 C9orf72Q96LT7 481 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 BBC3Q96PG8 261 aaPredicted RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 FERD3LQ96RJ6 166 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 OR52A5Q9H2C5 316 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 XKR8Q9H6D3 395 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 UCK1Q9HA47 277 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 SLC39A1Q9NY26 324 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 AKAP7Q9P0M2 348 aaPredicted RBP11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 SLC24A2Q9UI40 661 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 PLAGL1Q9UM63 463 aa11.21□□□□□ -0.61
LSP1P2-201ENST00000479042 CACNA1GO43497 2377 aa11.21□□□□□ -0.62
LSP1P2-201ENST00000479042 IGSF10Q6WRI0 2623 aa11.21□□□□□ -0.62
LSP1P2-201ENST00000479042 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 TEX51A0A1B0GUA7 166 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 UBA6A0AVT1 1052 aaPredicted RBP11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 KRT87PA6NCN2 255 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 KCNJ13O60928 360 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 VAPBO95292 243 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 C9P02748 559 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 WT1P19544 449 aaPredicted RBP11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 FOXM1Q08050 763 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 SQSTM1Q13501 440 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 TRA2AQ13595 282 aaKnown RBP eCLIP11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 ITIH4Q14624 930 aa11.2□□□□□ -0.62
LSP1P2-201ENST00000479042 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms