RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ISCA2Q86U28 154 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 GGNQ86UU5 652 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SPATA24Q86W54 205 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF280BQ86YH2 543 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TICAM1Q8IUC6 712 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM151BQ8IW70 566 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CLYBLQ8N0X4 340 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PGBD5Q8N414 524 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SPATA6LQ8N4H0 392 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PCYOX1LQ8NBM8 494 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PRSS33Q8NF86 280 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RHEBL1Q8TAI7 183 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 BRSK1Q8TDC3 778 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 C2orf15Q8WU43 125 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ATOH1Q92858 354 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 IGSF8Q969P0 613 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PSMG2Q969U7 264 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ROPN1LQ96C74 230 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ASB9Q96DX5 294 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MOCOSQ96EN8 888 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TMA16Q96EY4 203 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 DUS3LQ96G46 650 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MARK4Q96L34 752 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CEP295NLQ96MC4 621 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RPRD1AQ96P16 312 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 KLHL5Q96PQ7 755 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 NPAS2Q99743 824 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SEMA3CQ99985 751 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 AARSD1Q9BTE6 412 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 EFHD1Q9BUP0 239 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ERVK-6Q9BXR3 956 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TRIM15Q9C019 465 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MAGEH1Q9H213 219 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 EPB41L1Q9H4G0 881 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TFB2MQ9H5Q4 396 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ALG9Q9H6U8 611 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ELAC1Q9H777 363 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SYTL2Q9HCH5 934 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PCDH12Q9NPG4 1184 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ACSS2Q9NR19 701 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CATSPERZQ9NTU4 200 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 FAM86C1Q9NVL1 165 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 INTS10Q9NVR2 710 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CACNA2D2Q9NY47 1150 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PLK2Q9NYY3 685 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.9□□□□□ -1.631e-7■□□□□ 8.1
SF3B6-202ENST00000478050 ADA2Q9NZK5 511 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MARCH2Q9P0N8 246 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CROTQ9UKG9 612 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CNOT11Q9UKZ1 510 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TMCO1Q9UM00 188 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TBC1D30Q9Y2I9 924 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 FIS1Q9Y3D6 152 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PRKAB1Q9Y478 270 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ST14Q9Y5Y6 855 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SLC4A7Q9Y6M7 1214 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ZFC3H1O60293 1989 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TRANK1O15050 2925 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 NAV2Q8IVL1 2488 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MICAL3Q7RTP6 2002 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 KIAA1671Q9BY89 1806 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 DNAH12Q6ZR08 3092 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MAST4O15021 2626 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 C15orf38-AP3S2A0A0A6YYH1 394 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SMIM31A0A1B0GVY4 71 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TCRBV3S1A0A5B6 114 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CCDC162PA2VCL2 907 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MTMR11A4FU01 709 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CAPN8A6NHC0 703 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 F8W810 466 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MRASO14807 208 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 AZIN1O14977 448 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PFDN6O15212 129 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 NRP2O60462 931 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ACSL4O60488 711 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 B4GALT3O60512 393 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 DNAJA2O60884 412 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SEMA7AO75326 666 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 VPS4BO75351 444 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SUPT7LO94864 414 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 HTR3BO95264 441 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CRTAMO95727 393 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 GOT2P00505 430 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SLC4A1P02730 911 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 HPXP02790 462 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PYGLP06737 847 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CELA3BP08861 270 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ZDHHC11BP0C7U3 371 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PABPC4LP0CB38 370 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ZCCHC18P0CG32 403 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CKBP12277 381 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF37AP17032 561 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 KCNA5P22460 613 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PSMA3P25788 255 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CCND3P30281 292 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 OR1E1P30953 314 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 DPP6P42658 865 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CDKN2DP55273 166 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CDH4P55283 916 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6V0D1P61421 351 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms