RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CKMT2P17540 419 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ARSDP51689 593 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 AFF1P51825 1210 aaKnown RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CCNHP51946 323 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 TRIM32Q13049 653 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CCNIQ14094 377 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PPP1R3AQ16821 1122 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CARD16Q5EG05 197 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CWF19L1Q69YN2 538 aaKnown RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ZNF783Q6ZMS7 281 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PRR23BQ6ZRT6 265 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 OFCC1Q8IZS5 231 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 KCNA7Q96RP8 456 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ACTR3BQ9P1U1 418 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ASF1AQ9Y294 204 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 GJB5O95377 273 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PABPC1P11940 636 aaKnown RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CYP4F3Q08477 520 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PWP1Q13610 501 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CHRNA6Q15825 494 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 SPATS1Q496A3 300 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CASP12Q6UXS9 341 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ZC3H7AQ8IWR0 971 aaKnown RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ARHGAP12Q8IWW6 846 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 LRRC37AA6NMS7 1700 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 FPGTO14772 594 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 GUCY1B2O75343 617 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 RAP2AP10114 183 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CCNA2P20248 432 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 UNC50Q53HI1 259 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 CMPK2Q5EBM0 449 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PPCDCQ96CD2 204 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 C1QTNF7Q9BXJ2 289 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 KRCC1Q9NPI7 259 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 MTHFD1P11586 935 aaKnown RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 FDXRP22570 491 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CAPGP40121 348 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CDKN2DP55273 166 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 TLE2Q04725 743 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 C1DQ13901 141 aaKnown RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 ZCCHC7Q8N3Z6 543 aaKnown RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 IFT80Q9P2H3 777 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 KLHL20Q9Y2M5 609 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 U3KQV3 271 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 WASH4PA8MWX3 477 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 SOD2P04179 222 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 PTPN2P17706 415 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 IDH2P48735 452 aaKnown RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 GSK3BP49841 420 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 ELP6Q0PNE2 266 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 DGCR6Q14129 220 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 TGFBIQ15582 683 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 SLC44A4Q53GD3 710 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 FAM46CQ5VWP2 391 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CNKSR3Q6P9H4 555 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 PHYKPLQ8IUZ5 450 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 OR4A15Q8NGL6 344 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 TSPEARQ8WU66 669 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 NSMCE3Q96MG7 304 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 PLGRKTQ9HBL7 147 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 KRT84Q9NSB2 600 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CXCR6O00574 342 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 TLL1O43897 1013 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 AOC2O75106 756 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 GSTM1P09488 218 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 TMPRSS11BQ86T26 416 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 C11orf74Q86VG3 221 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 KRT73Q86Y46 540 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 FBXO27Q8NI29 283 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 MAPK15Q8TD08 544 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 QSER1Q2KHR3 1735 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 TRMUO75648 421 aaKnown RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 PRNPP04156 253 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 FESP07332 822 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CCR3P51677 355 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CNPY1Q3B7I2 92 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 KDELC1Q6UW63 502 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 FAM43BQ6ZT52 329 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 OTOP2Q7RTS6 562 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 GOLGA7Q7Z5G4 137 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 SVOPLQ8N434 492 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 ZNF540Q8NDQ6 660 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 OR7A2PQ8NGA2 310 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 OR4F6Q8NGB9 312 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CGREF1Q99674 301 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 WDR83Q9BRX9 315 aaKnown RBP14.4□□□□□ -0.1
HDAC6-220ENST00000477528 HTATIP2Q9BUP3 242 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 CD320Q9NPF0 282 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 VPS51Q9UID3 782 aa14.4□□□□□ -0.1
HDAC6-220ENST00000477528 A0A1W2PRU2 124 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 H3BN98 237 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CLDN7O95471 211 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 EPORP19235 508 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 UFM1P61960 85 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 NFKB2Q00653 900 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 GALNT1Q10472 559 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 TRIM60Q495X7 471 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ATAD3BQ5T9A4 648 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 KIAA0319Q5VV43 1072 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms