RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ZFAND1Q8TCF1 268 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TBCKQ8TEA7 893 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 DNAJA4Q8WW22 397 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 HERVK_113Q902F9 699 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SNX19Q92543 992 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FIG4Q92562 907 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FCGR1BQ92637 280 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RPL3LQ92901 407 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 MUL1Q969V5 352 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FKBP10Q96AY3 582 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SH3KBP1Q96B97 665 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ROPN1LQ96C74 230 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 AP2M1Q96CW1 435 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 MRRFQ96E11 262 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 C11orf24Q96F05 449 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 DYNLL2Q96FJ2 89 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SERAC1Q96JX3 654 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 UBXN10Q96LJ8 280 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF512Q96ME7 567 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 BBS4Q96RK4 519 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 LBHD1Q9BQE6 289 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PELOQ9BRX2 385 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 NAT9Q9BTE0 207 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CENPOQ9BU64 300 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ILKAPQ9H0C8 392 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 MEGF9Q9H1U4 602 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 BRD9Q9H8M2 597 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 LRRC40Q9H9A6 602 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 KANSL2Q9H9L4 492 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 GBA2Q9HCG7 927 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TUFT1Q9NNX1 390 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CCNB1IP1Q9NPC3 277 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CD93Q9NPY3 652 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 WASH6PQ9NQA3 447 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 INTS10Q9NVR2 710 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 MAT2BQ9NZL9 334 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 IFT80Q9P2H3 777 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 DNMT3BQ9UBC3 853 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PHF11Q9UIL8 331 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF112Q9UJU3 913 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ANAPC7Q9UJX3 599 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF214Q9UL59 606 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TRAPPC4Q9Y296 219 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 NAALAD2Q9Y3Q0 740 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ASB4Q9Y574 426 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PCDHGB2Q9Y5G2 931 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 HEMK1Q9Y5R4 338 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 KLF2Q9Y5W3 355 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SNX13Q9Y5W8 968 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PEX16Q9Y5Y5 336 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 BACE2Q9Y5Z0 518 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 COPG1Q9Y678 874 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TEX264Q9Y6I9 313 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 HSPE1-MOB4S4R3N1 261 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 DDX60LQ5H9U9 1706 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PAPPA2Q9BXP8 1791 aa4.65□□□□□ -1.66
PTCD3-212ENST00000477520 A0A1W2PQ67 120 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TCRBV9S1A1TA0A576 114 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FAM170AA1A519 330 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 OR6C65A6NJZ3 312 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CLDN24A6NM45 220 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF99A8MXY4 864 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 E5RJQ4 531 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PRSS44E7EML9 344 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SGK1O00141 431 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FOXN3O00409 490 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 BTN3A1O00481 513 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF195O14628 629 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 AIM2O14862 343 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TRIM24O15164 1050 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 HDAC3O15379 428 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 DCXO43602 365 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PI15O43692 258 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GATCO43716 136 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RFPL1O75677 317 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CNTN5O94779 1100 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TSPAN12O95859 305 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GH2P01242 217 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 APOC1P02654 83 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SUPT20HL2P0C7V6 817 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TRIM49P0CI25 452 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TRIM49CP0CI26 452 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GLULP15104 373 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ITGB6P18564 788 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 XRCC1P18887 633 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RAB3AP20336 220 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 C4BPBP20851 252 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 MATN1P21941 496 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NR4A1P22736 598 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 EEF1B2P24534 225 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PSMA4P25789 261 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 HLA-DMAP28067 261 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SSTR1P30872 391 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SHMT1P34896 483 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GARSP41250 739 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NR4A2P43354 598 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms