RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SLC52A3Q9NQ40 469 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 MBNL1Q9NR56 388 aaKnown RBP5.89□□□□□ -1.47
SMC5-203ENST00000475540 ZNF215Q9UL58 517 aaPredicted RBP5.89□□□□□ -1.47
SMC5-203ENST00000475540 FLT1P17948 1338 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 SMCHD1A6NHR9 2005 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 DOK2O60496 412 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 PRSS56P0CW18 603 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 RNF224P0DH78 156 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 HOXC8P31273 242 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 GEMIN4P57678 1058 aaKnown RBP5.88□□□□□ -1.47
SMC5-203ENST00000475540 HILS1P60008 231 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 RPS18P62269 152 aaKnown RBP5.88□□□□□ -1.47
SMC5-203ENST00000475540 PMP22Q01453 160 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 PLA2G7Q13093 441 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 DENND5BQ6ZUT9 1274 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 INTS8Q75QN2 995 aaKnown RBP5.88□□□□□ -1.47
SMC5-203ENST00000475540 L3MBTL4Q8NA19 623 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 TRIM58Q8NG06 486 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 OR2T12Q8NG77 320 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 TAS1R2Q8TE23 839 aa5.88□□□□□ -1.47
SMC5-203ENST00000475540 TREX2Q9BQ50 279 aaPredicted RBP5.88□□□□□ -1.47
SMC5-203ENST00000475540 TMX4Q9H1E5 349 aaPredicted RBP5.88□□□□□ -1.47
SMC5-203ENST00000475540 CHMP1AQ9HD42 196 aaPredicted RBP5.88□□□□□ -1.47
SMC5-203ENST00000475540 A0A1W2PR77 199 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 B4DLN1 442 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 HHLA1C9JL84 531 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 MMP9P14780 707 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 PRLRP16471 622 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 CBLP22681 906 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 SUOXP51687 545 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 MRPL12P52815 198 aaKnown RBP5.87□□□□□ -1.47
SMC5-203ENST00000475540 RAB41Q5JT25 222 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 ALS2CLQ60I27 953 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 RPAP2Q8IXW5 612 aaPredicted RBP5.87□□□□□ -1.47
SMC5-203ENST00000475540 FAM81BQ96LP2 452 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 CEP295NLQ96MC4 621 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 ZNF582Q96NG8 517 aaPredicted RBP5.87□□□□□ -1.47
SMC5-203ENST00000475540 RHNO1Q9BSD3 238 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 MOV10L1Q9BXT6 1211 aaKnown RBP5.87□□□□□ -1.47
SMC5-203ENST00000475540 SLA2Q9H6Q3 261 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 HHATLQ9HCP6 504 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 OLFML3Q9NRN5 406 aa5.87□□□□□ -1.47
SMC5-203ENST00000475540 SEC63Q9UGP8 760 aaKnown RBP5.87□□□□□ -1.47
SMC5-203ENST00000475540 ZNF644Q9H582 1327 aaPredicted RBP5.87□□□□□ -1.47
SMC5-203ENST00000475540 KIAA1210Q9ULL0 1709 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 MED19A0JLT2 244 aaPredicted RBP5.86□□□□□ -1.47
SMC5-203ENST00000475540 ELOVL7A1L3X0 281 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 A6NCN8 305 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 PLOD2O00469 737 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 THOP1P52888 689 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 ERVK11-1P61568 191 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 PRKAA1Q13131 559 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 C15orf39Q6ZRI6 1047 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 PLD3Q8IV08 490 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 APLFQ8IW19 511 aaPredicted RBP5.86□□□□□ -1.47
SMC5-203ENST00000475540 CRYBG2Q8N1P7 616 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 ZNF248Q8NDW4 579 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 MTERF3Q96E29 417 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 RTN4RQ9BZR6 473 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 HAUS2Q9NVX0 235 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 ARHGEF38Q9NXL2 777 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 TAS2R14Q9NYV8 317 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 COQ3Q9NZJ6 369 aa5.86□□□□□ -1.47
SMC5-203ENST00000475540 SUCLA2Q9P2R7 463 aaPredicted RBP5.86□□□□□ -1.47
SMC5-203ENST00000475540 FSD2A1L4K1 749 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 A6NL46 340 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 NTN3O00634 580 aaPredicted RBP5.85□□□□□ -1.47
SMC5-203ENST00000475540 CSPG5O95196 566 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 PLA2G4BP0C869 781 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 LIFP15018 202 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 ALDH4A1P30038 563 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 CASP2P42575 452 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 CLNS1AP54105 237 aaKnown RBP5.85□□□□□ -1.47
SMC5-203ENST00000475540 TMF1P82094 1093 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 MC1RQ01726 317 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 KIAA1644Q3SXP7 199 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 FAM98BQ52LJ0 330 aaKnown RBP5.85□□□□□ -1.47
SMC5-203ENST00000475540 PLEKHS1Q5SXH7 462 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 TMEM190Q8WZ59 177 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 DAZLQ92904 295 aaKnown RBP5.85□□□□□ -1.47
SMC5-203ENST00000475540 FAM120BQ96EK7 910 aaKnown RBP5.85□□□□□ -1.47
SMC5-203ENST00000475540 BLOC1S4Q9NUP1 217 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 INTS10Q9NVR2 710 aaKnown RBP5.85□□□□□ -1.47
SMC5-203ENST00000475540 NPAP1Q9NZP6 1156 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 SLC7A7Q9UM01 511 aa5.85□□□□□ -1.47
SMC5-203ENST00000475540 OR6C76A6NM76 312 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 SERPINB2P05120 415 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 CD48P09326 243 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 SLC15A1P46059 708 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 GNB1P62873 340 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 KCNJ10P78508 379 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 CREB5Q02930 508 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 MELKQ14680 651 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 DUSP28Q4G0W2 176 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 FAM53AQ6NSI3 398 aaPredicted RBP5.84□□□□□ -1.47
SMC5-203ENST00000475540 MFSD6Q6ZSS7 791 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 ERLEC1Q96DZ1 483 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 SENP5Q96HI0 755 aaPredicted RBP5.84□□□□□ -1.47
SMC5-203ENST00000475540 LRR1Q96L50 414 aa5.84□□□□□ -1.47
SMC5-203ENST00000475540 BARD1Q99728 777 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms