RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 TMEM135Q86UB9 458 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 LMNTD2Q8IXW0 634 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 CLDN19Q8N6F1 224 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 AGBL5Q8NDL9 886 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 MFSD3Q96ES6 412 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 PRR11Q96HE9 360 aaPredicted RBP18.52■□□□□ 0.56
SYF2-203ENST00000474160 C12orf66Q96MD2 445 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 NAT9Q9BTE0 207 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 CARD6Q9BX69 1037 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 WWP1Q9H0M0 922 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 SEMA6CQ9H3T2 930 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 ASCL3Q9NQ33 180 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 LOXL2Q9Y4K0 774 aa18.52■□□□□ 0.56
SYF2-203ENST00000474160 CDRT15L2A8MXV6 281 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 CASC3O15234 703 aaKnown RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 USP1O94782 785 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 TUBB4AP04350 444 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 ANKRD34CP0C6C1 535 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 AMD1P17707 334 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 OGNP20774 298 aaKnown RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 RPS3P23396 243 aaKnown RBP eCLIP18.51■□□□□ 0.55
SYF2-203ENST00000474160 PPM1FP49593 454 aaPredicted RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 ADARP55265 1226 aaKnown RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 PCBP4P57723 403 aaKnown RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 CFHR1Q03591 330 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 GPR18Q14330 331 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 MORF4L2Q15014 288 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 DNAJC21Q5F1R6 531 aaKnown RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 NKAIN2Q5VXU1 208 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 XKR5Q6UX68 686 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 ZNF761Q86XN6 746 aaPredicted RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 NCSTNQ92542 709 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 CCDC74BQ96LY2 380 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 PANX3Q96QZ0 392 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 INSM2Q96T92 566 aaPredicted RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 TBC1D10AQ9BXI6 508 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 OR52A5Q9H2C5 316 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 KIR3DX1Q9H7L2 352 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 IMP3Q9NV31 184 aaKnown RBP18.51■□□□□ 0.55
SYF2-203ENST00000474160 GNPTGQ9UJJ9 305 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 ACSL6Q9UKU0 697 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 PSMD13Q9UNM6 376 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 PIKFYVEQ9Y2I7 2098 aa18.51■□□□□ 0.55
SYF2-203ENST00000474160 A0A087WV48 116 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 A0A1W2PNU3 283 aaPredicted RBP18.5■□□□□ 0.55
SYF2-203ENST00000474160 SRRM3A6NNA2 597 aaPredicted RBP18.5■□□□□ 0.55
SYF2-203ENST00000474160 H3BMM5 538 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 TAF4O00268 1085 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 KPNA5O15131 536 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 FANCGO15287 622 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 RRP8O43159 456 aaKnown RBP18.5■□□□□ 0.55
SYF2-203ENST00000474160 AVILO75366 819 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 VAPBO95292 243 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 C9P02748 559 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 HOXB3P14651 431 aaPredicted RBP18.5■□□□□ 0.55
SYF2-203ENST00000474160 CSTF2P33240 577 aaKnown RBP eCLIP18.5■□□□□ 0.55
SYF2-203ENST00000474160 CAPZBP47756 277 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 TYSND1Q2T9J0 566 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 ANKRD20A4Q4UJ75 823 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 ARHGAP22Q7Z5H3 698 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 JAMLQ86YT9 394 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 KLHL7Q8IXQ5 586 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 ZNF248Q8NDW4 579 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 GABPB2Q8TAK5 448 aaPredicted RBP18.5■□□□□ 0.55
SYF2-203ENST00000474160 CALML6Q8TD86 181 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 ZDHHC12Q96GR4 267 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 MVB12BQ9H7P6 319 aa18.5■□□□□ 0.55
SYF2-203ENST00000474160 USP24Q9UPU5 2620 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 B4E171 279 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 NVLO15381 856 aaKnown RBP18.49■□□□□ 0.55
SYF2-203ENST00000474160 NDUFS3O75489 264 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 TNFSF15O95150 251 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 TTC4O95801 387 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 POLBP06746 335 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 IVDP26440 423 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 ARNTP27540 789 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 CD82P27701 267 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 TSPAN7P41732 249 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 ARCN1P48444 511 aaKnown RBP18.49■□□□□ 0.55
SYF2-203ENST00000474160 TMEM164Q5U3C3 297 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 SYT10Q6XYQ8 523 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 MAATS1Q7Z4T9 603 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 PDZD3Q86UT5 571 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 CARFQ8N187 725 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 BBOF1Q8ND07 529 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 ACVR1CQ8NER5 493 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 ASZ1Q8WWH4 475 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 ELMO1Q92556 727 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 LRRC39Q96DD0 335 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 SIGLEC10Q96LC7 697 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 RMDN2Q96LZ7 410 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 CD180Q99467 661 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 INTS10Q9NVR2 710 aaKnown RBP18.49■□□□□ 0.55
SYF2-203ENST00000474160 PRSS21Q9Y6M0 314 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 RPS6KL1Q9Y6S9 549 aa18.49■□□□□ 0.55
SYF2-203ENST00000474160 URB1O60287 2271 aaKnown RBP18.48■□□□□ 0.55
SYF2-203ENST00000474160 SLC5A10A0PJK1 596 aa18.48■□□□□ 0.55
SYF2-203ENST00000474160 FAM187AA6NFU0 413 aa18.48■□□□□ 0.55
SYF2-203ENST00000474160 GOLGA8MH3BSY2 632 aa18.48■□□□□ 0.55
SYF2-203ENST00000474160 MATN2O00339 956 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms