RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 IL27RAQ6UWB1 636 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 CERS6Q6ZMG9 384 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 PLEKHH3Q7Z736 793 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 GPR149Q86SP6 731 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 ARMC8Q8IUR7 673 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 AMER2Q8N7J2 671 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 KBTBD8Q8NFY9 601 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 OR6Q1Q8NGQ2 317 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 ARRDC2Q8TBH0 407 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 STARD8Q92502 1023 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 FAM120BQ96EK7 910 aaKnown RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 YME1L1Q96TA2 773 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 C19orf43Q9BQ61 176 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 DGCR6LQ9BY27 220 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 SLC29A3Q9BZD2 475 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 KLHL25Q9H0H3 589 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 ZNF229Q9UJW7 825 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 GJD2Q9UKL4 321 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 INVSQ9Y283 1065 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 PCDHGA8Q9Y5G5 932 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 BRCA1P38398 1863 aaKnown RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 ASPDHA6ND91 283 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 DRGXA6NNA5 263 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 HAS3O00219 553 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 UPK1AO00322 258 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 CA12O43570 354 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 PRAMEF11O60813 436 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 CNTN5O94779 1100 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 MMP2P08253 660 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 PRPS2P11908 318 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 IGFBP5P24593 272 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 PTX3P26022 381 aaPredicted RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 FMO4P31512 558 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 S100A5P33763 92 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 YAP1P46937 504 aaKnown RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 CLCNKBP51801 687 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 ADAM17P78536 824 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 ZNF45Q02386 682 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 EN1Q05925 392 aaPredicted RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 CD47Q08722 323 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 SLC10A7Q0GE19 358 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 GRB14Q14449 540 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 HIST2H2ACQ16777 129 aaPredicted RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 UPP1Q16831 310 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 IMPG1Q17R60 797 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 SYT6Q5T7P8 510 aaPredicted RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 DEPDC1Q5TB30 811 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 LYPLAL1Q5VWZ2 237 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 DLEU7Q6UYE1 221 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 GLT6D1Q7Z4J2 308 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 MRPL10Q7Z7H8 261 aaKnown RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 ITIH5Q86UX2 942 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 MCOLN3Q8TDD5 553 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 SLC22A17Q8WUG5 538 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 FBLIM1Q8WUP2 373 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 TANKQ92844 425 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 FKBP10Q96AY3 582 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 SLC39A13Q96H72 371 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 ITCHQ96J02 903 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 TMEM74Q96NL1 305 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 MAGEH1Q9H213 219 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 INTS7Q9NVH2 962 aaKnown RBP6.03□□□□□ -1.44
HERC4-209ENST00000473533 ENOPH1Q9UHY7 261 aa6.03□□□□□ -1.44
HERC4-209ENST00000473533 PATJQ8NI35 1801 aa6.02□□□□□ -1.44
HERC4-209ENST00000473533 EVPLLA8MZ36 301 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ASNA1O43681 348 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PTTG1O95997 202 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PTPN2P17706 415 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CHRM3P20309 590 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 OLR1P78380 273 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 RING1Q06587 406 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 VAC14Q08AM6 782 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ABHD18Q0P651 414 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TRAF3Q13114 568 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CYP2A13Q16696 494 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PTPRNQ16849 979 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 DPY19L1Q2PZI1 675 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 AP5B1Q2VPB7 878 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 FBXO43Q4G163 708 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 SLC2A7Q6PXP3 512 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MILR1Q7Z6M3 343 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZNF548Q8NEK5 533 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 FBXO30Q8TB52 745 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PPM1MQ96MI6 270 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 NSUN5Q96P11 429 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 KCNA7Q96RP8 456 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 GAD1Q99259 594 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 GPR21Q99679 349 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CINPQ9BW66 212 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 SPATA9Q9BWV2 254 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TM9SF3Q9HD45 589 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 DCAF13Q9NV06 445 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 MPP6Q9NZW5 540 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PCDHB8Q9UN66 801 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ERVK-11Q9UQG0 969 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TIMM22Q9Y584 194 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 NUP205Q92621 2012 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 A0A096LPI6 279 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms