RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 SOCS6O14544 535 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 GJB3O75712 270 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 SLC25A12O75746 678 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 KDM4BO94953 1096 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 NKX2-2O95096 273 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 DGKAP23743 735 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 DLX5P56178 289 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 IRF3Q14653 427 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 PCGF3Q3KNV8 242 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 RAB41Q5JT25 222 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 GGNBP1Q5YKI7 109 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 SEPT14Q6ZU15 432 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 TAOK1Q7L7X3 1001 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 WDR63Q8IWG1 891 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 TANKQ92844 425 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 CDCA5Q96FF9 252 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 TMEM19Q96HH6 336 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 TMEM47Q9BQJ4 181 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 MAK16Q9BXY0 300 aaKnown RBP4.41□□□□□ -1.7
CNOT4-209ENST00000473470 SMARCAD1Q9H4L7 1026 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 ESRP2Q9H6T0 727 aaKnown RBP4.41□□□□□ -1.7
CNOT4-209ENST00000473470 EVA1AQ9H8M9 152 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 RANGRFQ9HD47 186 aaPredicted RBP4.41□□□□□ -1.7
CNOT4-209ENST00000473470 MKKSQ9NPJ1 570 aaPredicted RBP4.41□□□□□ -1.7
CNOT4-209ENST00000473470 ANKEF1Q9NU02 776 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 NKIRAS2Q9NYR9 191 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 C1RLQ9NZP8 487 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 RCOR1Q9UKL0 485 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 AMDHD2Q9Y303 409 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 CFAP54Q96N23 3096 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 PCDH11XQ9BZA7 1347 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 PCDH11YQ9BZA8 1340 aa4.41□□□□□ -1.7
CNOT4-209ENST00000473470 ATRXP46100 2492 aa4.4□□□□□ -1.7
CNOT4-209ENST00000473470 BDP1A6H8Y1 2624 aa4.4□□□□□ -1.7
CNOT4-209ENST00000473470 MED19A0JLT2 244 aaPredicted RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 IFITM10A6NMD0 228 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 HNRNPCL2B2RXH8 293 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 B4DLN1 442 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 LINC01565O15544 149 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 CLDN14O95500 239 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 STARD3NLO95772 234 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 AFPP02771 609 aaKnown RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 SNX16P57768 344 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 ZBED6P86452 979 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 CXCL9Q07325 125 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 HYAL1Q12794 435 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 ACCSLQ4AC99 568 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 B3GNT6Q6ZMB0 384 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 HACE1Q8IYU2 909 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 RNF168Q8IYW5 571 aaPredicted RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 OR8H2Q8N162 312 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 LSMEM1Q8N8F7 131 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 LMNTD1Q8N9Z9 388 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 LNX1Q8TBB1 728 aaPredicted RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 CALML4Q96GE6 196 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 PPP1R13BQ96KQ4 1090 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 SEPT5Q99719 369 aaPredicted RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 NCAPGQ9BPX3 1015 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 SUCLA2Q9P2R7 463 aaPredicted RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 CNOT8Q9UFF9 292 aaKnown RBP4.4□□□□□ -1.71
CNOT4-209ENST00000473470 PCDHGB4Q9UN71 923 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 CEPT1Q9Y6K0 416 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 RPS6KL1Q9Y6S9 549 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 SPTBN4Q9H254 2564 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 KDM3BQ7LBC6 1761 aa4.4□□□□□ -1.71
CNOT4-209ENST00000473470 MRC1P22897 1456 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 A0A1W2PQ09 198 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 DAB1O75553 588 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 RB1P06400 928 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 IL7RP16871 459 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 HOXC9P31274 260 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 AMPHP49418 695 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 METAP2P50579 478 aaKnown RBP eCLIP4.39□□□□□ -1.71
CNOT4-209ENST00000473470 TFAP4Q01664 338 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 ACSM2AQ08AH3 577 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 ZNF155Q12901 538 aaPredicted RBP4.39□□□□□ -1.71
CNOT4-209ENST00000473470 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
CNOT4-209ENST00000473470 STK4Q13043 487 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 NAE1Q13564 534 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 RRS1Q15050 365 aaKnown RBP4.39□□□□□ -1.71
CNOT4-209ENST00000473470 CDONQ4KMG0 1287 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 FAM76BQ5HYJ3 339 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 FRG2Q64ET8 278 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 PMS2CLQ68D20 193 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 HIST2H2BCQ6DN03 193 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 HIST2H2BDQ6DRA6 164 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 KRT74Q7RTS7 529 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 TAGAPQ8N103 731 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 POC1AQ8NBT0 407 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 C1orf131Q8NDD1 294 aaKnown RBP4.39□□□□□ -1.71
CNOT4-209ENST00000473470 DNASE2BQ8WZ79 361 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 FIG4Q92562 907 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 ERO1AQ96HE7 468 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 PKP4Q99569 1192 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
CNOT4-209ENST00000473470 OGFRQ9NZT2 677 aa4.39□□□□□ -1.71
CNOT4-209ENST00000473470 FBXL17Q9UF56 701 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms