RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 POLE2P56282 527 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 KIF5AQ12840 1032 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 PLCL1Q15111 1095 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 PARP6Q2NL67 630 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
COL9A3-208ENST00000469802 CAPRIN2Q6IMN6 1127 aaKnown RBP15.92■□□□□ 0.14
COL9A3-208ENST00000469802 ARHGEF18Q6ZSZ5 1173 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 FAM71DQ8N9W8 422 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 HM13Q8TCT9 377 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 HEXDCQ8WVB3 486 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 HES6Q96HZ4 224 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 DNAJC1Q96KC8 554 aaKnown RBP15.92■□□□□ 0.14
COL9A3-208ENST00000469802 C12orf66Q96MD2 445 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 KIR3DX1Q9H7L2 352 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 SLC24A2Q9UI40 661 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 TUBD1Q9UJT1 453 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 CAPN6Q9Y6Q1 641 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 TCRBV7S2A1N4TA0A589 114 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 CCL22O00626 93 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 ZIC2O95409 532 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-208ENST00000469802 SLC35G4P0C7Q5 338 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 RALBP11234 206 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 F8A1P23610 371 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 PSMA3P25788 255 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 CDC25BP30305 580 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 MC4RP32245 332 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 P3H1Q32P28 736 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 GPR33Q49SQ1 333 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 CYB5D1Q6P9G0 228 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 C6orf15Q6UXA7 325 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-208ENST00000469802 MICALCLQ6ZW33 695 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 KMT5CQ86Y97 462 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 LILRA3Q8N6C8 439 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-208ENST00000469802 GALNT6Q8NCL4 622 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 COPS8Q99627 209 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 MAP3K3Q99759 626 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 FAM117AQ9C073 453 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 SLC25A18Q9H1K4 315 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 LRRC40Q9H9A6 602 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 NLE1Q9NVX2 485 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-208ENST00000469802 IMPACTQ9P2X3 320 aa15.91■□□□□ 0.14
COL9A3-208ENST00000469802 FLNBO75369 2602 aaKnown RBP15.9■□□□□ 0.14
COL9A3-208ENST00000469802 C17orf113A0A1B0GUU1 675 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 CFAP99D6REC4 459 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 SUV39H1O43463 412 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 SPAG6O75602 509 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 SNRNP200O75643 2136 aaKnown RBP15.9■□□□□ 0.14
COL9A3-208ENST00000469802 KIAA0754O94854 1291 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 TIAF1O95411 115 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 AP2A1O95782 977 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 ATP1B2P14415 290 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-208ENST00000469802 FOLR1P15328 257 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 ACRV1P26436 265 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 CCR10P46092 362 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 CDKN1CP49918 316 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-208ENST00000469802 TMPRSS15P98073 1019 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 NFKB2Q00653 900 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 MC1RQ01726 317 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 KCNAB2Q13303 367 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 TUBB3Q13509 450 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 DNTTIP2Q5QJE6 756 aaKnown RBP15.9■□□□□ 0.14
COL9A3-208ENST00000469802 PRICKLE2Q7Z3G6 844 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 OOSP2Q86WS3 158 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 PPP1R3BQ86XI6 285 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 RASGRP3Q8IV61 690 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 CARFQ8N187 725 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 LRRC45Q96CN5 670 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 RNF31Q96EP0 1072 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 DCUN1D1Q96GG9 259 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 TMEM121Q9BTD3 319 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 OR52A5Q9H2C5 316 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 FAM96AQ9H5X1 160 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 ZDHHC3Q9NYG2 299 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 FAM8A1Q9UBU6 413 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 CROTQ9UKG9 612 aa15.9■□□□□ 0.14
COL9A3-208ENST00000469802 EBLN1P0CF75 366 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 PRKAR1AP10644 381 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 KCNAB1Q14722 419 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 CERS6Q6ZMG9 384 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 SERPINA9Q86WD7 417 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 D2HGDHQ8N465 521 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 SIDT2Q8NBJ9 832 aaKnown RBP15.89■□□□□ 0.13
COL9A3-208ENST00000469802 STAMBPL1Q96FJ0 436 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 ELMO2Q96JJ3 720 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 FCRL4Q96PJ5 515 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 CCM2Q9BSQ5 444 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 COG4Q9H9E3 785 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 PDE7BQ9NP56 450 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 HRASLS2Q9NWW9 162 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 LNPEPQ9UIQ6 1025 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 RARRES3Q9UL19 164 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 PCDHGA6Q9Y5G7 932 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 HEMK1Q9Y5R4 338 aaPredicted RBP15.89■□□□□ 0.13
COL9A3-208ENST00000469802 MRPS18BQ9Y676 258 aaKnown RBP15.89■□□□□ 0.13
COL9A3-208ENST00000469802 SPTBP11277 2137 aa15.89■□□□□ 0.13
COL9A3-208ENST00000469802 FER1L5A0AVI2 2057 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 MROH6A6NGR9 719 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 PYCARD-AS1I3L0S3 204 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 PTMAP06454 111 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms