RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 YIF1BQ5BJH7 314 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TYW3Q6IPR3 259 aaKnown RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 SYCE2Q6PIF2 218 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FBXO46Q6PJ61 603 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 LNX2Q8N448 690 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SNX31Q8N9S9 440 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 LINC01599Q8WXQ3 324 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 MYLIPQ8WY64 445 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 LRRC39Q96DD0 335 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 COPS4Q9BT78 406 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FAM126AQ9BYI3 521 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 KCNK4Q9NYG8 393 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 COPS3Q9UNS2 423 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 HRH3Q9Y5N1 445 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 LCHNA4D1U4 455 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TTLL8A6PVC2 850 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 E7ENX8 843 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TCEA3O75764 348 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 CLIC3O95833 236 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 GNAO1P09471 354 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 MBL2P11226 248 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 BMP4P12644 408 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 F8A1P23610 371 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TPMTP51580 245 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 AIF1P55008 147 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 LSM3P62310 102 aaKnown RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 CYP4F8P98187 520 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 GAD2Q05329 585 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 MGAT3Q09327 533 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TBCCQ15814 346 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FAM187BQ17R55 369 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FSCBQ5H9T9 825 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 DENND1CQ8IV53 801 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 DSELQ8IZU8 1212 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 LRRC52Q8N7C0 313 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 CYGBQ8WWM9 190 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 NECTIN4Q96NY8 510 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SLITRK1Q96PX8 696 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 VPS11Q9H270 941 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 PPA2Q9H2U2 334 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 COG4Q9H9E3 785 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 PCDHB16Q9NRJ7 776 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 PCDHB12Q9Y5F1 795 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TP53BP1Q12888 1972 aaPredicted RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 A0A1W2PRQ8 180 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 PIRO00625 290 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 DDX3YO15523 660 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 TYROBPO43914 113 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 TGDSO95455 350 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 ECDO95905 644 aaPredicted RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 HPGDP15428 266 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 CD40LGP29965 261 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 MAN1A1P33908 653 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 PPM1FP49593 454 aaPredicted RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 HADHBP55084 474 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 ILF2Q12905 390 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 TXNDC8Q6A555 127 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 HEATR6Q6AI08 1181 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 FAM171BQ6P995 826 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 CRTC3Q6UUV7 619 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 LCLAT1Q6UWP7 414 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 ZSWIM9Q86XI8 627 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 DCP1BQ8IZD4 617 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 ZNF558Q96NG5 402 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 KLHL5Q96PQ7 755 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 TCF25Q9BQ70 676 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 CINPQ9BW66 212 aaPredicted RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 DUSP16Q9BY84 665 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 SIRPGQ9P1W8 387 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 COPG2Q9UBF2 871 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 SLCO3A1Q9UIG8 710 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 KLHL20Q9Y2M5 609 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 CCDC182A6NF36 153 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 TRIM49D1C9J1S8 452 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 E5RI56 91 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 SEC24AO95486 1093 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 TOP3BO95985 862 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 JCHAINP01591 159 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 GALTP07902 379 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 RNF224P0DH78 156 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 CSTF2P33240 577 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUP50-214ENST00000469163 TBX4P57082 545 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 SMAD4Q13485 552 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 BRMS1LQ5PSV4 323 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 ZFP1Q6P2D0 407 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 ZBTB49Q6ZSB9 765 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 NPAS4Q8IUM7 802 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 PARP8Q8N3A8 854 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 LINC01465Q8N7H1 131 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 FBXO22Q8NEZ5 403 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 GANCQ8TET4 914 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 RBM18Q96H35 190 aaKnown RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 KCTD14Q9BQ13 255 aaPredicted RBP9.81□□□□□ -0.84
NUP50-214ENST00000469163 EBF4Q9BQW3 602 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 BDH2Q9BUT1 245 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 ZNF416Q9BWM5 594 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 AKIP1Q9NQ31 210 aa9.81□□□□□ -0.84
NUP50-214ENST00000469163 PRDM8Q9NQV8 689 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms