RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 UCP3P55916 312 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 HDAC4P56524 1084 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NUP107P57740 925 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PSMC6P62333 389 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NOMO3P69849 1222 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TXNL4AP83876 142 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 PDE1BQ01064 536 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CNTN2Q02246 1040 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KRT17Q04695 432 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CBX3Q13185 183 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 STX3Q13277 289 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TDGQ13569 410 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ATP1A4Q13733 1029 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 OASLQ15646 514 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 MAPK6Q16659 721 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KLHL38Q2WGJ6 581 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZNF829Q3KNS6 432 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TBRG1Q3YBR2 411 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CCDC153Q494R4 210 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CERKLQ49MI3 558 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 AASDHQ4L235 1098 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 ARHGAP15Q53QZ3 475 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RABGAP1LQ5R372 815 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RNASEH2BQ5TBB1 312 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 C6orf163Q5TEZ5 329 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MFSD4BQ5TF39 518 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 METTL21CQ5VZV1 264 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 FAM160B1Q5W0V3 765 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ANKRD54Q6NXT1 300 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 DUS1LQ6P1R4 473 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZFP1Q6P2D0 407 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 DCLRE1AQ6PJP8 1040 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TMC5Q6UXY8 1006 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CD300LDQ6UXZ3 194 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RNF207Q6ZRF8 634 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NCCRP1Q6ZVX7 275 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 C1orf186Q6ZWK4 172 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZNF720Q7Z2F6 126 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PPP1R32Q7Z5V6 425 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PRPF39Q86UA1 669 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TTC30AQ86WT1 665 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RASGRP3Q8IV61 690 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SRRM1Q8IYB3 904 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 ULK2Q8IYT8 1036 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RNF168Q8IYW5 571 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 SYCP3Q8IZU3 236 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 VPS52Q8N1B4 723 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MPP5Q8N3R9 675 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SLC15A4Q8N697 577 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MIGA1Q8NAN2 632 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TDRD5Q8NAT2 981 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZFP28Q8NHY6 868 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 HM13Q8TCT9 377 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 DQX1Q8TE96 717 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 CREB3L4Q8TEY5 395 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RAB24Q969Q5 203 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZUFSPQ96AP4 578 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 LENG9Q96B70 501 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 HAUS1Q96CS2 278 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 OXNAD1Q96HP4 312 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 PANX3Q96QZ0 392 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PCDHB18PQ96TA0 734 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 YME1L1Q96TA2 773 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CDCA3Q99618 268 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 MESP1Q9BRJ9 268 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 FRMD8Q9BZ67 464 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TRIM31Q9BZY9 425 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KLHL4Q9C0H6 718 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RNF32Q9H0A6 362 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 INTS2Q9H0H0 1204 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 GHITMQ9H3K2 345 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ABHD16BQ9H3Z7 469 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ELAC1Q9H777 363 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 PLGRKTQ9HBL7 147 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MRM3Q9HC36 420 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TUFT1Q9NNX1 390 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KRT84Q9NSB2 600 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ETNK2Q9NVF9 386 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SPATA6Q9NWH7 488 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 PPP1R14DQ9NXH3 145 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MCM9Q9NXL9 1143 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NDE1Q9NXR1 346 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TAS2R14Q9NYV8 317 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TBC1D7Q9P0N9 293 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 GCNT4Q9P109 453 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TBC1D14Q9P2M4 693 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 XPR1Q9UBH6 696 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 HEY2Q9UBP5 337 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ANAPC5Q9UJX4 755 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KLK13Q9UKR3 277 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RAB23Q9ULC3 237 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ARHGAP26Q9UNA1 814 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PSMD13Q9UNM6 376 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CNTN6Q9UQ52 1028 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ACTL7AQ9Y615 435 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MAD1L1Q9Y6D9 718 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 STAB1Q9NY15 2570 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
SORT1-202ENST00000466471 LCTP09848 1927 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms