RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CCDC6Q16204 474 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 INSCQ1MX18 579 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ACSBG2Q5FVE4 666 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 PRAMEF14Q5SWL7 426 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 PLEKHS1Q5SXH7 462 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 METRNLQ641Q3 311 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 TCEAL6Q6IPX3 200 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 OTOAQ7RTW8 1153 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 RD3Q7Z3Z2 195 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 CLEC14AQ86T13 490 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 CROCCP2Q86T23 111 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 TRABD2AQ86V40 505 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 RASGRP3Q8IV61 690 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 VRK3Q8IV63 474 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ZBTB2Q8N680 514 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ZNF548Q8NEK5 533 aaPredicted RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 ANKRD49Q8WVL7 239 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ELMO1Q92556 727 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 INPP5DQ92835 1189 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 GLMNQ92990 594 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 TCEAL3Q969E4 200 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ZBTB9Q96C00 473 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 TSPAN17Q96FV3 270 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 PGM2Q96G03 612 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ELF4Q99607 663 aaPredicted RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 TSSK1BQ9BXA7 367 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ZDHHC5Q9C0B5 715 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 OR52A5Q9H2C5 316 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 TMBIM4Q9HC24 238 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 SARS2Q9NP81 518 aaKnown RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 KLC4Q9NSK0 619 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 TRMT6Q9UJA5 497 aaKnown RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 KCNK6Q9Y257 313 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 GPSM3Q9Y4H4 160 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 A0A1B0GTQ1 180 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 A0A1W2PPM1 405 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PROB1E7EW31 1015 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 EIF3FO00303 357 aaPredicted RBP10.92□□□□□ -0.66
VCP-204ENST00000466100 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 KPNA5O15131 536 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PIAS2O75928 621 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 EML2O95834 649 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 C2P06681 752 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 SAT1P21673 171 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 EPHA8P29322 1005 aaPredicted RBP10.92□□□□□ -0.66
VCP-204ENST00000466100 CRABP2P29373 138 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PDHA2P29803 388 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PREPP48147 710 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 HNRNPKP61978 463 aaKnown RBP eCLIP10.92□□□□□ -0.66
VCP-204ENST00000466100 IRX4P78413 519 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 DLG1Q12959 904 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 RPA4Q13156 261 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
VCP-204ENST00000466100 HLA-BQ31612 363 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PRRT3Q5FWE3 981 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 LGSNQ5TDP6 509 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 UGT3A1Q6NUS8 523 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 IL27RAQ6UWB1 636 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 CPNE9Q8IYJ1 553 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 SLC22A15Q8IZD6 547 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 CENPLQ8N0S6 344 aaPredicted RBP10.92□□□□□ -0.66
VCP-204ENST00000466100 ASZ1Q8WWH4 475 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 UBXN10Q96LJ8 280 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 SLC13A1Q9BZW2 595 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 DPEP2Q9H4A9 486 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 IL21RQ9HBE5 538 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 GPAMQ9HCL2 828 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 UCKL1Q9NWZ5 548 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 PCOLCE2Q9UKZ9 415 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 DNAJC16Q9Y2G8 782 aa10.92□□□□□ -0.66
VCP-204ENST00000466100 ASXL3Q9C0F0 2248 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 A0A096LPK6 155 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 LNP1A1A4G5 178 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 LMO7DNF2Z398 122 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 H3BM21 787 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 RGS16O15492 202 aaPredicted RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 AQP9O43315 295 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ATP8B1O43520 1251 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 LRP3O75074 770 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 LMNAP02545 664 aaKnown RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 APOA4P06727 396 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ZNF806P0C7X5 589 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 MYZAPP0CAP1 466 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 GIMD1P0DJR0 217 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 CBSLP0DN79 551 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ENO3P13929 434 aaPredicted RBP10.91□□□□□ -0.66
VCP-204ENST00000466100 BRAFP15056 766 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ENGP17813 658 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 VCLP18206 1134 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TGM1P22735 817 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 DGKAP23743 735 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ACADLP28330 430 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 TYK2P29597 1187 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 CBSP35520 551 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 SLC26A3P40879 764 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ACTR1BP42025 376 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 SLC12A2P55011 1212 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 ACTR1AP61163 376 aa10.91□□□□□ -0.66
VCP-204ENST00000466100 IRF9Q00978 393 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms