RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CCDC77Q9BR77 488 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 SEMA4CQ9C0C4 833 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 CCDC68Q9H2F9 335 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 SUDS3Q9H7L9 328 aaPredicted RBP17.17■□□□□ 0.34
CPSF4-209ENST00000465132 UGT1A7Q9HAW7 530 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 UGT1A10Q9HAW8 530 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 UGT1A8Q9HAW9 530 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 SIRPGQ9P1W8 387 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 RABGEF1Q9UJ41 708 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 GPR34Q9UPC5 381 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 SLC17A4Q9Y2C5 497 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 COMMD10Q9Y6G5 202 aa17.17■□□□□ 0.34
CPSF4-209ENST00000465132 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
CPSF4-209ENST00000465132 RP1P56715 2156 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 K7ENP7 123 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 GAPDHSO14556 408 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-209ENST00000465132 ITGA2BP08514 1039 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 CTSEP14091 401 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 ECHS1P30084 290 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 LRP8Q14114 963 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 LY6DQ14210 128 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 TCEA2Q15560 299 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 INO80CQ6PI98 192 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-209ENST00000465132 PACS1Q6VY07 963 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 GALNT7Q86SF2 657 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 SLC26A11Q86WA9 606 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 GALNT13Q8IUC8 556 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 CCDC74AQ96AQ1 378 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 LIN37Q96GY3 246 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-209ENST00000465132 C9orf72Q96LT7 481 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 MOSPD1Q9UJG1 213 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 CORO1CQ9ULV4 474 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-209ENST00000465132 DGKBQ9Y6T7 804 aa17.16■□□□□ 0.34
CPSF4-209ENST00000465132 CCL22O00626 93 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 KMOO15229 486 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 BANF1O75531 89 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 OR56A5P0C7T3 313 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 ATP1B2P14415 290 aaPredicted RBP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 PMS2P54278 862 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 SRP54P61011 504 aaKnown RBP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 CLN3Q13286 438 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 HSP90AA5PQ58FG0 334 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 ZNF470Q6ECI4 717 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 RD3Q7Z3Z2 195 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 B3GNT8Q7Z7M8 397 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 GKN2Q86XP6 184 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 CILP2Q8IUL8 1156 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 IGDCC3Q8IVU1 814 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 AGGF1Q8N302 714 aaeCLIP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 GFM1Q96RP9 751 aaKnown RBP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 CYTH2Q99418 400 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 PARD6BQ9BYG5 372 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 OR2AG1Q9H205 316 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 CNOT6Q9ULM6 557 aaKnown RBP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 IKBKGQ9Y6K9 419 aa17.15■□□□□ 0.34
CPSF4-209ENST00000465132 V9GYY5 206 aaPredicted RBP17.15■□□□□ 0.34
CPSF4-209ENST00000465132 IGLV3-16A0A075B6K0 115 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 A0A087WUV0 522 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 PRSS38A1L453 326 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 D6RAR5 112 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 TMX2-CTNND1H3BSU7 103 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 J3QKU1 62 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 PRMT5O14744 637 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 PLD2O14939 933 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 KPNA5O15131 536 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 NUAK1O60285 661 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 FTH1P02794 183 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 CEACAM5P06731 702 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 ADARP55265 1226 aaKnown RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 CCL7P80098 99 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 EIF3IQ13347 325 aaKnown RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 FASTKD3Q14CZ7 662 aaKnown RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 KYNUQ16719 465 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 TYSND1Q2T9J0 566 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 KIAA1614Q5VZ46 1190 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 DOK6Q6PKX4 331 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 CCDC81Q6ZN84 652 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 LRRTM4Q86VH4 590 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 CNTN4Q8IWV2 1026 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 SCARF2Q96GP6 870 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 PANX3Q96QZ0 392 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 LGR4Q9BXB1 951 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 CDC42EP4Q9H3Q1 356 aaKnown RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 FAM96AQ9H5X1 160 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 LRRC4CQ9HCJ2 640 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 IARS2Q9NSE4 1012 aaKnown RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 TRNAU1APQ9NX07 287 aaKnown RBP17.14■□□□□ 0.33
CPSF4-209ENST00000465132 MOCS1Q9NZB8 636 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 ZNHIT2Q9UHR6 403 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 GNPTGQ9UJJ9 305 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 FBXO5Q9UKT4 447 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
CPSF4-209ENST00000465132 A0A1W2PQM1 296 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 GRID2O43424 1007 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ESR1P03372 595 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 RPLP0P05388 317 aaKnown RBP17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ABHD2P08910 425 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ERVK-10P10266 1014 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms