RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 HADHAP40939 763 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 MC1RQ01726 317 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 CDC20Q12834 499 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 KIF5AQ12840 1032 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 KCNAB2Q13303 367 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 GSE1Q14687 1217 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 DEFB109BQ30KR1 87 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.41■□□□□ 0.54
SF3A1-205ENST00000463818 DUS1LQ6P1R4 473 aaKnown RBP18.41■□□□□ 0.54
SF3A1-205ENST00000463818 SNX20Q7Z614 316 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 PPP1R3BQ86XI6 285 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 TMEM139Q8IV31 216 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 SYCE1Q8N0S2 351 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 NXPE1Q8N323 547 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 LILRA3Q8N6C8 439 aaPredicted RBP18.41■□□□□ 0.54
SF3A1-205ENST00000463818 HEXDCQ8WVB3 486 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 COPS8Q99627 209 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 C19orf43Q9BQ61 176 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 PDE7BQ9NP56 450 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 LNPEPQ9UIQ6 1025 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 MRPS18BQ9Y676 258 aaKnown RBP18.41■□□□□ 0.54
SF3A1-205ENST00000463818 SPTA1P02549 2419 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 UBA6A0AVT1 1052 aaPredicted RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 OR5K3A6NET4 321 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 MIF4GDA9UHW6 222 aaKnown RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 CFAP99D6REC4 459 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 SUV39H1O43463 412 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 FTCDO95954 541 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 SLC35G4P0C7Q5 338 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 CCNYL3P0C7X3 344 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 ATP1B2P14415 290 aaPredicted RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 OAS2P29728 719 aaKnown RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 MC4RP32245 332 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 DLSTP36957 453 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 ARL4DP49703 201 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 CDKN1CP49918 316 aaPredicted RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 KCNAB1Q14722 419 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 DNTTIP2Q5QJE6 756 aaKnown RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 KCTD11Q693B1 232 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 CAPRIN2Q6IMN6 1127 aaKnown RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 CERS6Q6ZMG9 384 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 MICALCLQ6ZW33 695 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 STAMBPL1Q96FJ0 436 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 DNAJC1Q96KC8 554 aaKnown RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 DESI2Q9BSY9 194 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 ZDHHC3Q9NYG2 299 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 SLC24A2Q9UI40 661 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 CROTQ9UKG9 612 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 RARRES3Q9UL19 164 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 PADI1Q9ULC6 663 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 R3HDM2Q9Y2K5 976 aaKnown RBP18.4■□□□□ 0.54
SF3A1-205ENST00000463818 COLEC10Q9Y6Z7 277 aa18.4■□□□□ 0.54
SF3A1-205ENST00000463818 OR6C74A6NCV1 312 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 KATNA1O75449 491 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 WISP1O95388 367 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 PRLHRP49683 370 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 KCNC4Q03721 635 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 KLF1Q13351 362 aaPredicted RBP18.39■□□□□ 0.53
SF3A1-205ENST00000463818 KRT33BQ14525 404 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 GPR33Q49SQ1 333 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 ZRANB3Q5FWF4 1079 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 ATP1A1-AS1Q5TC04 95 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 PWWP2BQ6NUJ5 590 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 CYB5D1Q6P9G0 228 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 ATG14Q6ZNE5 492 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 OOSP2Q86WS3 158 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 TXLNBQ8N3L3 684 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 SLC35B2Q8TB61 432 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 HM13Q8TCT9 377 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 RMDN2Q96LZ7 410 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 CD180Q99467 661 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 CCM2Q9BSQ5 444 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 KIR3DX1Q9H7L2 352 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 LRRC40Q9H9A6 602 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 NLE1Q9NVX2 485 aaPredicted RBP18.39■□□□□ 0.53
SF3A1-205ENST00000463818 TUBD1Q9UJT1 453 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 PCDHB3Q9Y5E6 796 aa18.39■□□□□ 0.53
SF3A1-205ENST00000463818 TLN1Q9Y490 2541 aaKnown RBP18.38■□□□□ 0.53
SF3A1-205ENST00000463818 C17orf113A0A1B0GUU1 675 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TCRBV7S2A1N4TA0A589 114 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TLCD2A6NGC4 264 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TERTO14746 1132 aaKnown RBP18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TIAF1O95411 115 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 EBLN1P0CF75 366 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 PRSS56P0CW18 603 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 NDUFS1P28331 727 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 GDF10P55107 478 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 ACY1Q03154 408 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TUBB3Q13509 450 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 CRTC2Q53ET0 693 aaPredicted RBP18.38■□□□□ 0.53
SF3A1-205ENST00000463818 ARMC6Q6NXE6 501 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TAS2R42Q7RTR8 314 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 BPHLQ86WA6 291 aaPredicted RBP18.38■□□□□ 0.53
SF3A1-205ENST00000463818 SERPINA9Q86WD7 417 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 PTRH1Q86Y79 214 aaKnown RBP18.38■□□□□ 0.53
SF3A1-205ENST00000463818 KMT5CQ86Y97 462 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 TAB3Q8N5C8 712 aaPredicted RBP18.38■□□□□ 0.53
SF3A1-205ENST00000463818 OR4E2Q8NGC2 313 aa18.38■□□□□ 0.53
SF3A1-205ENST00000463818 APOBEC4Q8WW27 367 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms