RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	LCA5L	O95447	670 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZBTB11	O95625	1053 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	KRT1	P04264	644 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	MSL3P1	P0C860	447 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZFX	P17010	805 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ARHGAP25	P42331	645 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	DYNLT1	P63172	113 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	MSLN	Q13421	630 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	GTF2H3	Q13889	308 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	INPP5J	Q15735	1006 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	BCL7A	Q4VC05	210 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZDHHC20	Q5W0Z9	365 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	KLHL35	Q6PF15	583 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZBTB2	Q8N680	514 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ENDOV	Q8N8Q3	282 aa	Known RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	GLIS1	Q8NBF1	620 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	FDCSP	Q8NFU4	85 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	OR2L2	Q8NH16	312 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	OR8K5	Q8NH50	307 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	GDAP1	Q8TB36	358 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZFPM2	Q8WW38	1151 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	RNF25	Q96BH1	459 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	LINC00615	Q96LM1	132 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	FCRL5	Q96RD9	977 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	WWP1	Q9H0M0	922 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	KCND1	Q9NSA2	647 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	IMP3	Q9NV31	184 aa	Known RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	PCMTD2	Q9NV79	361 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	POMT2	Q9UKY4	750 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	PCDHGB7	Q9Y5F8	929 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	ABCA12	Q86UK0	2595 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	HIVEP3	Q5T1R4	2406 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	FBN2	P35556	2912 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	SSU72P8	A0A1W2PR75	194 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	UBA6	A0AVT1	1052 aa	Predicted RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	OR6C74	A6NCV1	312 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	MGAT4D	A6NG13	374 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	MEN1	O00255	615 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	ARCN1	P48444	511 aa	Known RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	NR2C2	P49116	596 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	CCL11	P51671	97 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	RPS15	P62841	145 aa	Known RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	XIAP	P98170	497 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	MRPL49	Q13405	166 aa	Known RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	PLCL1	Q15111	1095 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	TCEAL1	Q15170	157 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	FNBP1L	Q5T0N5	605 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	SLC6A19	Q695T7	634 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	GLT6D1	Q7Z4J2	308 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	DAAM2	Q86T65	1068 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	OOSP2	Q86WS3	158 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	RFX6	Q8HWS3	928 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	TMEM126B	Q8IUX1	230 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZNF567	Q8N184	647 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	SLC25A41	Q8N5S1	370 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	OR1L3	Q8NH93	324 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	MR1	Q95460	341 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	TCTN2	Q96GX1	697 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	C12orf66	Q96MD2	445 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	SMAD5	Q99717	465 aa	Known RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	ANP32E	Q9BTT0	268 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	TLR10	Q9BXR5	811 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	NLN	Q9BYT8	704 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	PITPNM3	Q9BZ71	974 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	ACSS2	Q9NR19	701 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	HACD3	Q9P035	362 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	TCFL5	Q9UL49	500 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	HYOU1	Q9Y4L1	999 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815	FER1L5	A0AVI2	2057 aa		10.86	□□□□□ -0.67
PTPN7-204	ENST00000462815		F5H423	210 aa	Predicted RBP	10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	DDX3Y	O15523	660 aa	Known RBP	10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	TMEM63A	O94886	807 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	PRAMEF1	O95521	474 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	CLDN1	O95832	211 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	HLA-DPA1	P20036	260 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	PBLD	P30039	288 aa	Predicted RBP	10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	GSDMD	P57764	484 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	ITGA9	Q13797	1035 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	PPP2R5E	Q16537	467 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	CRB2	Q5IJ48	1285 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZFYVE27	Q5T4F4	411 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	MICALCL	Q6ZW33	695 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	DET1	Q7L5Y6	550 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	GAS2L3	Q86XJ1	694 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	EFCAB3	Q8N7B9	438 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	BLOC1S5	Q8TDH9	187 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	TFB1M	Q8WVM0	346 aa	Known RBP	10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	C19orf60	Q96EN9	201 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	TTC25	Q96NG3	672 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	CHP1	Q99653	195 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	IFNK	Q9P0W0	207 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	LUZP4	Q9P127	313 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	ACSL5	Q9ULC5	683 aa		10.85	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZNF451	Q9Y4E5	1061 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms