RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TM6SF1Q9BZW5 370 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 LRMDAQ9H2I8 198 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 CNOT10Q9H9A5 744 aaKnown RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 EBF2Q9HAK2 575 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 TMEM30AQ9NV96 361 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 GTF3C4Q9UKN8 822 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 DLGAP4Q9Y2H0 992 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 LIPGQ9Y5X9 500 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 SOS1Q07889 1333 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ZCWPW2A0A1B0GU75 182 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ARHGEF37A1IGU5 675 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ELOVL7A1L3X0 281 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ANKUB1A6NFN9 424 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PI4K2BG5E9Z4 385 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 TMEM178BH3BS89 294 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PLK4O00444 970 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 CLDN4O14493 209 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 TO15178 435 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 SYNCRIPO60506 623 aaKnown RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 KDM4BO94953 1096 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PMS2P2O95744 297 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 H1F0P07305 194 aaKnown RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 OR2T7P0C7T2 308 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 GLULP15104 373 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ACHEP22303 614 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 CBLP22681 906 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PSMA3P25788 255 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 HOXC8P31273 242 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 SLC6A6P31641 620 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 IL15P40933 162 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 POLGP54098 1239 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 CDH13P55290 713 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 BNC1Q01954 994 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 DDR1Q08345 913 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 DLG1Q12959 904 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 GAGE5Q13069 117 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 GAGE6Q13070 117 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PLA2G7Q13093 441 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 SETMARQ53H47 684 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PRR27Q6MZM9 219 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 TEX38Q6PEX7 206 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 RHBDF2Q6PJF5 856 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 MOXD1Q6UVY6 613 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PACS1Q6VY07 963 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 MSANTD1Q6ZTZ1 278 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ATG9AQ7Z3C6 839 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF595Q8IYB9 648 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 OR8H3Q8N146 312 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PELI3Q8N2H9 469 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PGBD5Q8N414 524 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 C9orf43Q8TAL5 461 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 LNX1Q8TBB1 728 aaPredicted RBP2.93□□□□□ -1.94
HDAC6-212ENST00000461608 CCDC107Q8WV48 283 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 SLC44A1Q8WWI5 657 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ASB5Q8WWX0 329 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ATP6V1E2Q96A05 226 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 NXNL1Q96CM4 212 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 RTP4Q96DX8 246 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 BICD1Q96G01 975 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 SFXN2Q96NB2 322 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 BTBD10Q9BSF8 475 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 ABHD6Q9BV23 337 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 PANK2Q9BZ23 570 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 CD93Q9NPY3 652 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 TCP11L1Q9NUJ3 509 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 B3GALT5Q9Y2C3 310 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 TTC3P53804 2025 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 FLT1P17948 1338 aa2.93□□□□□ -1.94
HDAC6-212ENST00000461608 HTR3EA5X5Y0 456 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 LACTBL1A8MY62 500 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 PRR32B1ATL7 298 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 KCNAB3O43448 404 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 TADA2AO75478 443 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 BMP10O95393 424 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 CLDN14O95500 239 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 CSF2RAP15509 400 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 GM2AP17900 193 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 CASTP20810 708 aaKnown RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 MCCP23508 829 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ATP5DP30049 168 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 AMPHP49418 695 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 NPY4RP50391 375 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 CAPZA1P52907 286 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 PITX1P78337 314 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 COG7P83436 770 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 EEF1A2Q05639 463 aaKnown RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 NFATC4Q14934 902 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 VWC2Q2TAL6 325 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF260Q3ZCT1 412 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ODF2Q5BJF6 829 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 SPOUT1Q5T280 376 aaKnown RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ALS2CLQ60I27 953 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 DCLRE1AQ6PJP8 1040 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 FIGLAQ6QHK4 219 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 C11orf57Q6ZUT1 292 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 DCP1BQ8IZD4 617 aaKnown RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 MUC20Q8N307 709 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 RYBPQ8N488 228 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms