RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 METRNLQ641Q3 311 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 ZNF549Q6P9A3 640 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 IYDQ6PHW0 289 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 CNSTQ6PJW8 725 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 PDZD3Q86UT5 571 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 LRRC6Q86X45 466 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 GIMAP7Q8NHV1 300 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 TCF12Q99081 682 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 NDNQ99608 321 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 SMYD2Q9NRG4 433 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 IMP3Q9NV31 184 aaKnown RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 NINJ2Q9NZG7 142 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 ZNF624Q9P2J8 865 aaPredicted RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 MTRF1LQ9UGC7 380 aaKnown RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 NFU1Q9UMS0 254 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 APOBEC2Q9Y235 224 aaKnown RBP12.56□□□□□ -0.4
COL18A1-206ENST00000459895 MED16Q9Y2X0 877 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 PCDHB1Q9Y5F3 818 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 PCDHGA1Q9Y5H4 931 aa12.56□□□□□ -0.4
COL18A1-206ENST00000459895 C17orf113A0A1B0GUU1 675 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 SLC5A10A0PJK1 596 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 KLHL33A6NCF5 533 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 PFDN6O15212 129 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 PPM1DO15297 605 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 KCNJ13O60928 360 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 TRIM16O95361 564 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 C1QAP02745 245 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 ESR1P03372 595 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 GSTM1P09488 218 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 MYBL2P10244 700 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 MTHFD1P11586 935 aaKnown RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 GABRB3P28472 473 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 CSF2RBP32927 897 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 HALP42357 657 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 PDX1P52945 283 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 INSM1Q01101 510 aaPredicted RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 GSTM4Q03013 218 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 MGAT5Q09328 741 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 FOXC1Q12948 553 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 RPE65Q16518 533 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 ABRAXAS1Q6UWZ7 409 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 WASH2PQ6VEQ5 465 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 PIM3Q86V86 326 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 VRK3Q8IV63 474 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 TRIM48Q8IWZ4 208 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 CFAP206Q8IYR0 622 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 JPH3Q8WXH2 748 aaPredicted RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 ATXN7L3BQ96GX2 97 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 C12orf66Q96MD2 445 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 TSSK1BQ9BXA7 367 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 CDC42EP4Q9H3Q1 356 aaKnown RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 POT1Q9NUX5 634 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 MOCS1Q9NZB8 636 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 CPNE7Q9UBL6 633 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
COL18A1-206ENST00000459895 CDYLQ9Y232 598 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 VPS9D1Q9Y2B5 631 aa12.55□□□□□ -0.4
COL18A1-206ENST00000459895 RP1P56715 2156 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 MED19A0JLT2 244 aaPredicted RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 RHPN2P1A8MT19 583 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 D6RAR5 112 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 HYAL3O43820 417 aaPredicted RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 HAUS5O94927 633 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 TOP3BO95985 862 aaKnown RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 RPLP0P05388 317 aaKnown RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 PKMP14618 531 aaKnown RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 AOAHP28039 575 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 SLC19A1P41440 591 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 LEPRP48357 1165 aaKnown RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 CD151P48509 253 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 ILKQ13418 452 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 BIRC2Q13490 618 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 GPR18Q14330 331 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 TMED2Q15363 201 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 HES3Q5TGS1 186 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 KIAA0408Q6ZU52 694 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 RAB44Q7Z6P3 723 aaPredicted RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 GALNT7Q86SF2 657 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 SLC9B2Q86UD5 537 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 Q8N9G6 341 aaPredicted RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 ADAMTS14Q8WXS8 1223 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 CXorf40BQ96DE9 158 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 PANX3Q96QZ0 392 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 INSM2Q96T92 566 aaPredicted RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 SLC30A3Q99726 388 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 HGH1Q9BTY7 390 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 ANKZF1Q9H8Y5 726 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 LRRC4CQ9HCJ2 640 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 GALPQ9UBC7 116 aa12.54□□□□□ -0.4
COL18A1-206ENST00000459895 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.42e-9■■□□□ 14.1
COL18A1-206ENST00000459895 ACSL5Q9ULC5 683 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms