RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SYTL2Q9HCH5 934 aa21.01■□□□□ 0.95
CPNE1-220ENST00000458038 PCDHGB7Q9Y5F8 929 aa21.01■□□□□ 0.95
CPNE1-220ENST00000458038 HEBP2Q9Y5Z4 205 aa21.01■□□□□ 0.95
CPNE1-220ENST00000458038 MATN2O00339 956 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 VPS4BO75351 444 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 SCRG1O75711 98 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 ANXA9O76027 345 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 SLC35G4P0C7Q5 338 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 LPOP22079 712 aaPredicted RBP21■□□□□ 0.95
CPNE1-220ENST00000458038 GEMP55040 296 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 MLLT10P55197 1068 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 IZUMO3Q5VZ72 239 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 EFCAB3Q8N7B9 438 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 GALNT11Q8NCW6 608 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 LINC00615Q96LM1 132 aaPredicted RBP21■□□□□ 0.95
CPNE1-220ENST00000458038 C12orf66Q96MD2 445 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 QKIQ96PU8 341 aaKnown RBP eCLIP21■□□□□ 0.956e-7■■■□□ 15.2
CPNE1-220ENST00000458038 C19orf43Q9BQ61 176 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 WWP1Q9H0M0 922 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 SLC24A2Q9UI40 661 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 VPS4AQ9UN37 437 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 BTRCQ9Y297 605 aa21■□□□□ 0.95
CPNE1-220ENST00000458038 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21■□□□□ 0.95
CPNE1-220ENST00000458038 NOTCH2Q04721 2471 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 OR6C74A6NCV1 312 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 C5orf60A6NFR6 353 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 PRAMEF1O95521 474 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 RALBP11234 206 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 PBLDP30039 288 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 PGDP52209 483 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 PRKAA1Q13131 559 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 TAF1AQ15573 450 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 BCL7AQ4VC05 210 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 FAM199XQ6PEV8 388 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 KATNAL2Q8IYT4 538 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 CPT1BQ92523 772 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 MR1Q95460 341 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 ZNF501Q96CX3 271 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 SLC25A23Q9BV35 468 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 AKIRIN1Q9H9L7 192 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 FANCEQ9HB96 536 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 MLXIPLQ9NP71 852 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 ACSS2Q9NR19 701 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 RSPH14Q9UHP6 348 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 HYOU1Q9Y4L1 999 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 ALG6Q9Y672 507 aa20.99■□□□□ 0.95
CPNE1-220ENST00000458038 CFAP20Q9Y6A4 193 aaKnown RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 TNRC6AQ8NDV7 1962 aaKnown RBP20.99■□□□□ 0.95
CPNE1-220ENST00000458038 TTLL8A6PVC2 850 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 BUD23O43709 281 aaKnown RBP20.98■□□□□ 0.95
CPNE1-220ENST00000458038 MFAP3LO75121 409 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 RAB40ALP0C0E4 278 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 LAMB3Q13751 1172 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 KRT33BQ14525 404 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 GSE1Q14687 1217 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 PAPD7Q5XG87 772 aaKnown RBP20.98■□□□□ 0.95
CPNE1-220ENST00000458038 HPS6Q86YV9 775 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 CNGA4Q8IV77 575 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 VSTM4Q8IW00 320 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 HEXDCQ8WVB3 486 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 DCUN1D1Q96GG9 259 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 TRIM55Q9BYV6 548 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 ING2Q9H160 280 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 ASB8Q9H765 288 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 LRRC4CQ9HCJ2 640 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 C1GALT1Q9NS00 363 aa20.98■□□□□ 0.95
CPNE1-220ENST00000458038 hCG_1818297A0A087WSY0 165 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 GPR39O43194 453 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 MAP3K7O43318 606 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 DNAJB5O75953 348 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 SRP72O76094 671 aaKnown RBP20.97■□□□□ 0.95
CPNE1-220ENST00000458038 MSL3P1P0C860 447 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 PTMSP20962 102 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 ITPRIPL1Q6GPH6 555 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 CAPRIN2Q6IMN6 1127 aaKnown RBP20.97■□□□□ 0.95
CPNE1-220ENST00000458038 CERS6Q6ZMG9 384 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 ULK4Q96C45 1275 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 RBM41Q96IZ5 413 aaKnown RBP20.97■□□□□ 0.95
CPNE1-220ENST00000458038 NLNQ9BYT8 704 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 GBA3Q9H227 469 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 SOHLH2Q9NX45 425 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 G3BP2Q9UN86 482 aaKnown RBP20.97■□□□□ 0.95
CPNE1-220ENST00000458038 AAR2Q9Y312 384 aaKnown RBP20.97■□□□□ 0.95
CPNE1-220ENST00000458038 ZNF451Q9Y4E5 1061 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 ARL5AQ9Y689 179 aa20.97■□□□□ 0.95
CPNE1-220ENST00000458038 C17orf113A0A1B0GUU1 675 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 AGAP14A8MT82 685 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 AGTP01019 485 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 PDGFAP04085 211 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 VARSP26640 1264 aaKnown RBP20.96■□□□□ 0.95
CPNE1-220ENST00000458038 CA5AP35218 305 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 KPNA2P52292 529 aaKnown RBP20.96■□□□□ 0.95
CPNE1-220ENST00000458038 RPS18P62269 152 aaKnown RBP20.96■□□□□ 0.95
CPNE1-220ENST00000458038 ADCY2Q08462 1091 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 GPS2Q13227 327 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 GPR19Q15760 415 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 RANBP10Q6VN20 620 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 BBS12Q6ZW61 710 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 DET1Q7L5Y6 550 aa20.96■□□□□ 0.95
CPNE1-220ENST00000458038 ACVR1CQ8NER5 493 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms